Author Commit Message Commit Date David Young 20e59d90e9f Break metadata reads and writes into up to three pieces, the non-page-aligned
piece in the beginning, 1 or more full pages, and whatever is leftover at the
end. Passes all of our tests. 03 Mar 2020 David Young 2646ee0ba79 Add an environment variable, H5_SHADOW_INDEX_FAIL, that I can set to an
unsigned integer value that tells at which index to inject a failure
for testing purposes. I used this to establish that I can start the
shadow-index lookup test with a previous seed and see the same tests run
again. 02 Mar 2020 David Young 32f6a742b3b Add a test for shadow-index lookups per the specification agreed with John and
Mike and described in my email "testing estimates version 2." 28 Feb 2020 David Young 3cb259c5a26 So that I can use PASSED(); anywhere a statement can go, #define PASSED() with
a do-while wrapper. 28 Feb 2020 David Young 0a662ea4489 No, Robb Matzke did *not* write this file. Get to the point in a
copy-and-pasted comment. 28 Feb 2020 David Young b233408fe85 Move the `swmr` log-outlet declaration to H5FDvfd_swmr_private.h and use `swmr`
as the parent outlet of a new outlet for messages about the motion of the
shadow index. 28 Feb 2020 David Young ac4afca0c20 Shave 44 lines off of H5PB_read() by gathering a bunch of checks into one if
condition, reducing diagnostic checks, single-spacing, etc. 27 Feb 2020 David Young 42e6eba1e1c Don't re-test a condition that's assert()'d at function entry and
couldn't change in the mean time, but do be paranoid and re-assert. 26 Feb 2020 David Young 56a9459eb57 On the reader, zero the shadow-index entries before filling fields from the
shadow file so that members like `garbage` are not filled with garbage that
fools us, later. 26 Feb 2020 David Young 8b2ba616ebf Update some comments. 26 Feb 2020 David Young 4b70e13e14a Where n is the number of page-table/shadow-index entries, avoid spending O(n^2)
time in H5PB_dest(). While we're in H5PB_dest(), mark deleted shadow-index
entries as "garbage" and skip the O(n) shadow index-entries copy.
Rename shadow index-entry member `moved_to_hdf5_file` to `moved_to_lower_file`
while I'm in here---NFCI. 26 Feb 2020 David Young d859bc4ba7f Pass the right parameter, H5F_shared_t * not H5F_t *. (Grr, serious warnings
not treated as errors....) 26 Feb 2020 David Young 9d5bb32b83d Add log outlets `h5mf` and `h5mf_defer` and write some diagnostic
messages to them.
Move and update a comment about removing (all) items from the deferred queue
before processing them.
Bug fix: don't leak file space, add back to the deferred queue all items that
were not disposed of. 24 Feb 2020 David Young 9a29c2212b1 Move all frequently-read fields---ls_resolved, ls_state, ls_parent---to the top
of hlog_outlet_t so that they're likely to be in the same cacheline. 24 Feb 2020 David Young bdc6d8ffcd3 For bool, true, and false, #include <stdbool.h>. 24 Feb 2020 David Young ce35b2f35fa Change a couple more occurrences of "sink" to "outlet." 24 Feb 2020 David Young 1a4097e55ca Don't use the __ prefix for attributes __unused and such, since that's reserved
for the system software, IIUC, and it clashes with a symbol on CentOS.
Instead, use a _ prefix. 24 Feb 2020 David Young 48ca10f80ee Improve some comments: fix typos, shorten. 19 Feb 2020 David Young ac1912b361d Add a log outlet for shadow-index enlargement and use it instead of
mysteriously printing "ding ding!" when the shadow index is enlarged.
While I'm here, place the new index into place regardless of whether we succeed
at the deferred free of the old index's shadow-file space. 18 Feb 2020 David Young 323e8f8d8b3 Delete an out-of-date comment. 18 Feb 2020 David Young d19456dae26 In process_deferred_frees(), remove *all* deferred frees from the
H5F_shared_t's queue before processing any, instead of removing just one,
processing it, removing another, processing it, and so on. While we processed
the first entry on the queue, we often called H5MF_xfree() again, which called
process_deferred_frees() again, which processed the first entry, calling
H5MF_xfree() again, and on and on, until the deferred frees list was exhausted.
This deep recursion showed up as a wide, tall ... 18 Feb 2020 David Young e43895e3b49 Don't perform superfluous casts. 18 Feb 2020 David Young a162fbbaaab Trim excess detail. Use shadow/lower file terminology. Be less wordy about
"page or multi-page entry." 18 Feb 2020 David Young dfd3f782ca7 Share latest changes: change many occurrences of "metadata" file/index/header
to "shadow" file/index/header. Simplify the description of freespace
management. Finish describing the floating shadow index. 12 Feb 2020 David Young 848219ccb8e Share my latest RFC changes. 12 Feb 2020 David Young f99bbd565ac Let us provide a default state to HLOG_OUTLET_MEDIUM_DEFN(). 12 Feb 2020 David Young f75430585b5 Add a new log outlet for individual deferred shadow frees and use it.
Rename a variable that tells whether or not we started with an empty
deferred-free list, and take care not to set it excessively. 12 Feb 2020 David Young ec6919449be Delete misleading "Programmer:" field and excessive decoration from the
H5FD_vfd_swmr_write() comment header. Delete a superfluous comment. Delete
some whitespace at EOL. NFCI. 12 Feb 2020 David Young 2b7347d5773 Record the state of a log outlet on first use and reuse that state on
subsequent hlog_fast() calls.
While I'm here, add a typedef, hlog_outlet_t, for struct hlog_outlet, and use
it. 11 Feb 2020 David Young a3e6c35b2d9 Whitespace repair. NFCI. 11 Feb 2020 David Young 41a8036511a Make a typedef for enum hlog_outlet_state, hlog_outlet_state_t, and use it.
NFCI. 11 Feb 2020 David Young 47438c741a2 Don't declare a bunch of undefined log outlets. 11 Feb 2020 David Young 2069224d0d0 Share my latest changes to the RFC. 11 Feb 2020 David Young 89247be6814 Add latest commentary on RFC. 10 Feb 2020 David Young 4f452ea3590 Call them log "outlets" not log "sinks". 10 Feb 2020 David Young 0d946278366 Rename loglib_ / LOGLIB_ to hlog_ / HLOG_, remove the syslog-based
implementation, rename hlog_log() to hlog(), hlog_vlog() to vhlog(), et cetera.
Rename hlog_lazy() to hlog_fast().
Define some log sinks and use them in the page buffer and in VFD SWMR. 10 Feb 2020 Larry Knox 86deef6dcd2 M Merge pull request #2887 in HDFFV/hdf5 from ~LRKNOX/hdf5_lrk:hdf5_1_10_7 to hdf5_1_10_7
* commit 'ed49d8eb584bc90a02aea323bb4b6881c3999cd7':
Correct versions in Tested Configuration Features Summary. 11 Sep 2020 Larry Knox ed49d8eb584 Correct versions in Tested Configuration Features Summary. 11 Sep 2020 Larry Knox bd1094856ff M Merge pull request #2883 in HDFFV/hdf5 from ~LRKNOX/hdf5_lrk:hdf5_1_10_7 to hdf5_1_10_7
* commit '1e02be328393806dbc41ca1b4f492fe93651a836':
Update version for HDF5 1.10.7 release. 07 Sep 2020 Larry Knox 1e02be32839 Update version for HDF5 1.10.7 release. 07 Sep 2020 Larry Knox 102f41b8b12 M Merge pull request #2881 in HDFFV/hdf5 from ~LRKNOX/hdf5_lrk:hdf5_1_10_7 to hdf5_1_10_7
* commit '9cfe1d920daf278fdc1d341d68548190bf414adf':
Add link for release source and binaries to README.txt. 04 Sep 2020 Larry Knox 9cfe1d920da M Merge branch 'hdf5_1_10_7' of https://bitbucket.hdfgroup.org/scm/~lrknox/hdf5_lrk into hdf5_1_10_7 04 Sep 2020 Larry Knox 7ea904933cc M Merge pull request #2877 in HDFFV/hdf5 from ~BYRN/hdf5_merge_adb:hdf5_1_10_7 to hdf5_1_10_7
* commit '94e15ff3e9d6e3cb7cf35fd8296e69a0f850aff5':
Add zlib and szip pages
Correct COPYING path 04 Sep 2020 Allen Byrne 94e15ff3e9d Add zlib and szip pages 04 Sep 2020 Allen Byrne 4294e570d15 Correct COPYING path 04 Sep 2020 Larry Knox 75bd8fe97dd M Merge pull request #2879 in HDFFV/hdf5 from ~LRKNOX/hdf5_lrk:hdf5_1_10_7 to hdf5_1_10_7
* commit 'abb2e30a0ec629c2e1ab86b19e027311299ff3f8':
Removed SZIP section of COPYING file.
Using SZIP/Libaec for clarity.
Add szip and zlib changes to makeInternalREADME.pl.
Update version to 1.10.7-2 Update packaging scripts => README file and RELEASE.txt. 04 Sep 2020 Larry Knox 464dd96c293 Add link for release source and binaries to README.txt. 04 Sep 2020 Larry Knox abb2e30a0ec Removed SZIP section of COPYING file. 04 Sep 2020 Larry Knox 28d1b2a5da3 Using SZIP/Libaec for clarity. 04 Sep 2020 Larry Knox e0b1b6b9b73 Add szip and zlib changes to makeInternalREADME.pl. 04 Sep 2020 ← Prev Next → require('plugin/commitgraph/network').applyCommits([{id: '20e59d90e9f108793713dcf9a00743aac05cc7c9', href: '/users/dyoung/repos/vchoi_fork/commits/20e59d90e9f108793713dcf9a00743aac05cc7c9',parents: [{ id: '2646ee0ba79d46d204d1b1330e0cbb8b4d9ba433' }]},{id: '2646ee0ba79d46d204d1b1330e0cbb8b4d9ba433', href: '/users/dyoung/repos/vchoi_fork/commits/2646ee0ba79d46d204d1b1330e0cbb8b4d9ba433',parents: [{ id: '32f6a742b3b1bcdd085e4d71a3dd69607d144863' }]},{id: '32f6a742b3b1bcdd085e4d71a3dd69607d144863', href: 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