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AuthorCommitMessageCommit Date
Dana RobinsonDana Robinson
5548799289eM[svn-r27918] Brought in sync with the trunk: r27860-27883 r27892-27916 Tested on: - h5committest - jam (parallel) fails with an existing, unrelated MPI config error - platypus fails with due to an existing, unrelated cmakehdf5 error where it does not recognize --enable-fortran2003.
Dana RobinsonDana Robinson
a89b064e2bdM[svn-r27916] Re-merge of r27884-27891 from the trunk + bugfix for a few H5S recursive functions where an aliased pointer was incorrectly set too early. Tested on: Ubuntu 15.04 (Linux 3.19 x86_64) w/ gcc 4.9.2 serial and parallel (w/ MPICH 3.1.4)
Dana RobinsonDana Robinson
5c0a8cc86eb[svn-r27912] Revert of r27887, which caused failures in the vds test. These changes will be merged more carefully so we can more easily identify any errors that arise. Tested on: Ubuntu 15.04 (Linux 3.19 x86_64) w/ gcc 4.9.2 serial and parallel (w/ MPICH 3.1.4)
Quincey KoziolQuincey Koziol
6f1dda474c2M[svn-r27887] Description: Merge changes from trunk to the branch. Tested on: MacOSX/64 10.10.5 (amazon) w/serial & parallel (h5committest not required on this branch)
Quincey KoziolQuincey Koziol
574ff3980af[svn-r27885] Description: Check if the layout has been retrieved before setting it again. Tested on: MacOSX/64 10.10.5 (amazon) w/serial & parallel (h5committest not required on this branch)
Neil FortnerNeil Fortner
dbdc9c1e2bd[svn-r27879] Move property list shutdown earlier in H5_term_library, since with VDS layout it needs to call into the H5D package. Tested: ummon
Quincey KoziolQuincey Koziol
10837a2a28d[svn-r27876] Description: Make virtual layout return to the property list occur in all cases, even on failure. Tested on: MacOSX/64 10.10.5 (amazon) w/serial & parallel (h5committest not needed on this branch)
Quincey KoziolQuincey Koziol
718b311c110M[svn-r27860] Description: Sync w/changes on trunk Tested on: Not necessary, text only...
Quincey KoziolQuincey Koziol
8572b0db32eM[svn-r27852] Description: Sync w/trunk (which was already from the VDS branch) Tested on: MacOSX/64 10.10.5 (amazon) w/serial (h5committest not required)
Quincey KoziolQuincey Koziol
4ad84456b3aM[svn-r27850] Description: Sync w/trunk Tested on: MacOSX/64 10.10.5 (amazon) w/serial (h5committest not required on this branch)
Quincey KoziolQuincey Koziol
d3c6b4ad724[svn-r27848] Description: Clean up warnings and some normalization against trunk. Tested: McaOSX/64 10.10.5 (amazon) w/serial & parallel (h5committest not required on this branch)
Quincey KoziolQuincey Koziol
fd90a6f5c4cM[svn-r27842] Description: Sync w/trunk. Tested on: MacOSX/64 10.10.5 (amazon) w/serial & parallel (although not CMake) (h5committest not required on this branch)
Dana RobinsonDana Robinson
209df7c3b09[svn-r27839] Removed generated autotools stragglers missed in trunk sync.
Quincey KoziolQuincey Koziol
0695d6366a6M[svn-r27835] Description: Sync w/trunk. Tested on: MacOSX/64 10.10.5 (amazon) w/serial & parallel (h5committest not required on this branch)
Elena PourmalElena Pourmal
68659dd411a[svn-r27769] Maintenance: Fixed example that failed daily tests. Tested on Mac Air, jam and ostrich.
Dana RobinsonDana Robinson
122bf84bb36M[svn-r27760] Brought r27631-27755 over from the trunk. tested on: jam
Neil FortnerNeil Fortner
f3da9564410[svn-r27701] RM offset initialization that is no longer necessary with the recent fix to H5Screate(). Tested: ummon
Neil FortnerNeil Fortner
dceb3f1818e[svn-r27673] rm unnecessary/unreachable code from H5S_get_select_hyper_nblocks Tested: ummon
Neil FortnerNeil Fortner
c839ed33839[svn-r27646] Add version number to VDS global heap object encoding. Fix handling of layout version number. Other minor fixes/cleanup. NOTE: This commit changes the file format for VDS, all files must be re-generated. Tested: ummon
Quincey KoziolQuincey Koziol
db8e289abe6[svn-r27632] Description: Revert changes to pass file pointer to selection serialize/deserialize routines. Also patch back in some changes that were merged out in the previous merge w/trunk. Tested on: MacOSX/64 10.10.5 (amazon) w/serial (h5committest not required on this branch)
Quincey KoziolQuincey Koziol
2c91cbecc64M[svn-r27630] Description: Bring in changes from the trunk, through r27628. Tested on: MacOSX/64 10.10.5 (amazon) w/serial (h5committest not required on this branch)
Neil FortnerNeil Fortner
1d3a7ec6515M[svn-r27606] Merge revisions 27593 through 27605 from trunk to vds branch. Tested: ummon
Dana RobinsonDana Robinson
05bf2c042c1[svn-r27599] Ran bin/reconfigure tested on: jam
Quincey KoziolQuincey Koziol
c2ce904d5d2[svn-r27598] Description: Check in misc. minor code cleanups, found during code review
Neil FortnerNeil Fortner
c365b9a59fbM[svn-r27593] Merge revisions 27453 through 27592 from trunk to vds branch. Tested: ummon
Neil FortnerNeil Fortner
3c5a088df0a[svn-r27547] Fill in public function descriptions from RM entries. Tested: ummon
Neil FortnerNeil Fortner
32bf83f1cf0[svn-r27546] Add tests for H5O__dset_bh_info (H5Oget_info) and unlimited selections in a region reference. Tested: ummon
Neil FortnerNeil Fortner
1821b64d495[svn-r27543] Add tests to cover remaining code coverage assertions in H5Shyper.c. Add more tests for unlimited selections. Fix bug related to empty unlimited source dataset. Tested: ummon
Neil FortnerNeil Fortner
e3bea916863[svn-r27538] Add tests to cover remaining code coverage assertions in src directory except for those in H5Doh.c and H5Shyper.c. Tested: ummon
Neil FortnerNeil Fortner
b1dcfc7a84e[svn-r27528] Modify printf implementation to not open source datasets that were previously opened when calculating the VDS extent, instead assuming they still exist. Tested: ummon
Neil FortnerNeil Fortner
6909d2033f0[svn-r27527] Add tests to hit code coverage assertions in H5Olayout.c. Fix issue in VDS delete routine. Tested: ummon
Neil FortnerNeil Fortner
69e2f53edbf[svn-r27520] Add new test for all 3 selection types in the same VDS. Minor cleanup in the tests. Tested: ummon
Neil FortnerNeil Fortner
1eff550df3e[svn-r27506] H5Dset_extent no longer holds all printf source datasets open. Other items identified during reviews. Tested: ummon
Neil FortnerNeil Fortner
cefda2ef0c5[svn-r27505] Add support for H5Dset_extent for VDS. Add tests for this. Other bug fixes/cleanup Tested: Kubuntu 64 (home computer)
Neil FortnerNeil Fortner
51e16157c29[svn-r27504] Change comments/code around to reflect decision to have virtual datasets always return TRUE when their is_alloc function is called. Tested: ummon
Neil FortnerNeil Fortner
07106823b47[svn-r27501] Add mapping validity checking to VDS open. Other minor fixes/cleanup. Tested: ummon
Neil FortnerNeil Fortner
1ba3706640c[svn-r27498] Add support for I/O after reopening a VDS with unlimited and/or printf mappings without calling H5Dget_space first. Add tests for this. Other minor fixes/cleanup. Tested: ummon
Neil FortnerNeil Fortner
0c4ec00cba8[svn-r27481] Add support for offset selections passed to H5Pset_virtual. Add test for this. Tested: ummon
Neil FortnerNeil Fortner
98f947ceaed[svn-r27479] Add checking for invalid inputs to H5Dset_virtual: point selections, incorrect numbers of elements selected, incorrect "slice" through limited dimensions, incorrect number of printf substitutions. Patch source selection space extent with bounds of selection if extent is unknown before returning via H5Pget_virtual_srcspace. Write updated VDS dataspace to file when it changes due to unlimited selections. Other minor fixes/cleanup. Tested: ummon
Neil FortnerNeil Fortner
bfd13897f6dM[svn-r27453] Merge revisions 27418 through 27452 from trunk to vds branch. Tested: ummon
Neil FortnerNeil Fortner
679a25a7c43[svn-r27450] Add descriptions for all non-public functions. Other comments. Add some input checking. Tested: ummon
Neil FortnerNeil Fortner
49076d6d229[svn-r27425] Implement support for H5Pequal with VDS properties. Testing for H5Pequal with VDS. Tested: ummon
Neil FortnerNeil Fortner
6bb109bf6d0[svn-r27424] Implement support for h5debug for VDS. Implement support for H5Pencode/decode with VDS properties. Testing for H5Pencode/decode with VDS. Relax assertion check for number of elements written to buffer as we do not check for overlaps in mappings. Other minor fixes/cleanup. Tested: ummon
Neil FortnerNeil Fortner
a8fc7eeaecf[svn-r27420] Fixed VDS test to handle the family driver correctly. Tested: ummon
Neil FortnerNeil Fortner
99a90f7fd6bM[svn-r27419] Merge revisions 27394 through 27418 from trunk to vds branch. Tested: ummon
Neil FortnerNeil Fortner
bd28a396d05[svn-r27398] Fixed potential issue layouts with compilers that do not support designated initializers. Tested: ummon
Neil FortnerNeil Fortner
5065c139c78M[svn-r27397] Merge revisions 27255 through 27393 from trunk to vds branch. Tested: ummon
Allen ByrneAllen Byrne
1ed71c50379[svn-r27324] Remove extra character on end of file name
Neil FortnerNeil Fortner
3c4dd5fa530[svn-r27323] Implement support for H5Dflush for VDS. Implement support for H5Ocopy on VDS. Testing for H5Ocopy on VDS. Fix check-vfd failure. Other minor fixes/cleanup. Note there is a preexisting failure in h5repack testing. Tested: ummon
Allen ByrneAllen Byrne
364c193744a[svn-r27321] Fixed VDS test framework to check for zlib, and fix file copy list paths