Author Commit Message Commit Date Quincey Koziol 85504f53761 [svn-r26195] Description:
Switch from enum H5D_CHUNK_BTREE to H5D_CHUNK_IDX_BTREE, along with a couple
of minor whitespace touchups.
Tested on:
Mac OSX/64 10.10.2 (amazon) w/serial & parallel
Linux/32 2.6.x (jam) w/serial 17 Feb 2015 Quincey Koziol 595b01658e9 [svn-r26193] Description:
Fix locking error when splitting root node of v1 B-tree, and simplify
the iteration over entries in a v1 B-tree (avoiding using the sibling pointer
also).
Tested on:
Mac OSX/64 10.10.2 (amazon) w/serial & parallel
Linux/32 2.6.x (jam) w/serial 17 Feb 2015 Quincey Koziol fd79bc3c1ae [svn-r26191] Description:
Track the min & max keys for a v2 B-tree, so it can more efficiently
determine if a key is present in the B-tree.
Tested on:
Mac OSX/64 10.10.2 (amazon) w/parallel & serial
Linux/32 2.6.x (jam) w/serial 17 Feb 2015 Scot Breitenfeld b28b5fade93 [svn-r26188] Merged autotools fixes into the trunk:
HDFFV-9089, HDFFV-9091, HDFFV-9092, HDFFV-9094, HDFFV-9095 16 Feb 2015 Mohamad Chaarawi 70561c8decc [svn-r26194] - add configure flag to enable or disable bigio tests.
- fix warnings in bigio test. 17 Feb 2015 Mohamad Chaarawi f8e4d85170a M [svn-r26184] merge from trunk. 16 Feb 2015 Mohamad Chaarawi 74fbb9e3279 [svn-r26180] merge configure fixes for HDFFV-9068,9069,9096,9097,9135 from autotools_rework branch:
- Remove Infering parallel compilers (C and Fortran) from configure.ac
- Remove restriction to build shared with parallel
- Cleanup parallel sections in configure.ac
- remove large file support checks
- MPE fixes.
tested with h5committest. 16 Feb 2015 Private HDF 9a376e4ee9e [svn-r26177] Snapshot version 1.9 release 214 15 Feb 2015 Albert Cheng d0c224ae188 [svn-r26173] HDF5-9117: if testing for proper working 'tr' command is needed.
Long time ago, the tr command in some platform does not work properly and this test was added
to detect broken tr and abort the configure process.
We are not aware of such broken tr command in current systems and decided to retire this test.
The setup of ${TR} is still needed as it is used to process DEBUG_PKG.
Tested: h5committested plus using "./configure --enable-debug=all" in jam. 13 Feb 2015 Scot Breitenfeld 7fcba337634 [svn-r26172] Fix for: HDFFV-8685 -- Have one include file to use for HL libraries
added hdf5.h to hdf5_hl.h 13 Feb 2015 Scot Breitenfeld 999440cbf80 [svn-r26170] Fix for HDFFV-8559
Correction of mistyped variable and removed implicit typing for interfaces. 13 Feb 2015 Allen Byrne d1897cb0382 [svn-r26162] Update versions 12 Feb 2015 Allen Byrne ab75986b8c7 [svn-r26161] Fix cmake case.
Turn on F2003 by default.
Set source properties in fortran cmake files. 12 Feb 2015 Neil Fortner 1b784081847 [svn-r26149] Fix potential memory error reported by valgrind in
H5D__link_chunk_collective_io. This would occur when performing collective I/O
on a dataset with only 1 chunk, and a participating process had nothing to read
or write.
Tested: jam, koala, ostrich (h5committest) 09 Feb 2015 Private HDF f4a60fc34c9 [svn-r26146] Snapshot version 1.9 release 213 08 Feb 2015 Scot Breitenfeld 06d1971f415 [svn-r26124] Fixed issue with deprecated symbols for H5G constants 04 Feb 2015 Scot Breitenfeld 5060fb1050c [svn-r26122] Fix for HDFFV-9040 h5rget_object_type_f returns different types than indicated by API
Slight change of global variable definitions from C.
Tested: jam. 03 Feb 2015 Allen Byrne 3946ec882b8 [svn-r26112] Add quotes around name 02 Feb 2015 Allen Byrne ba35eb0f059 [svn-r26109] Correct name of source file 02 Feb 2015 Allen Byrne fc93c6fe70e [svn-r26106] Disable flush1/flush2 test under debug VFD on Windows. 02 Feb 2015 Private HDF 67f41bf9f80 [svn-r26092] Snapshot version 1.9 release 212 01 Feb 2015 Mohamad Chaarawi a9cf3b658b9 [svn-r26087] update build procedure for Hopper (Cray).. only static now.
Will add shared when we introduce support later. 30 Jan 2015 Allen Byrne e05c75ea4ec [svn-r26074] fix test destination 29 Jan 2015 Allen Byrne 055348122df [svn-r26040] HDFFV-9018: Install pdb files to bin folder with dlls. 26 Jan 2015 Allen Byrne eb3900554ef [svn-r26036] HDFFV-8736: Patch H5PL.c and test for cygwin plugin support.
Tested: local linux and cygwin 26 Jan 2015 Mohamad Chaarawi f4e69ad5794 [svn-r26012] make the print format for address overflow error windows friendly. 23 Jan 2015 Scot Breitenfeld 374f064f829 [svn-r26011] Added (i.e. re-added) missing h5oget_info_c definition. 23 Jan 2015 Scot Breitenfeld 1e3f530848f [svn-r26010] Fix for:
HDFFV-9049
Intel 15.0 15.0.1 Fails with --enable-fortran2003
Added BIND to the Fortran 2003 functions.
Tested: windows (tested concept)
linux (--enable-fortran and --enable-fortran2003) 22 Jan 2015 Scot Breitenfeld 324f087d050 [svn-r26009] Code Comment cleanup:
-----------------------
Remove the numbers in the comments associated with:
H5G_UNKNOWN_F (-1)
H5G_LINK_F 0
H5G_GROUP_F 1
H5G_DATASET_F 2
H5G_TYPE_F 3
These should not be defined as a number since they can changed. They should be considered named parameters, not actual values.
HDFFV-9040
h5rget_object_type_f returns different types than indicated by API 22 Jan 2015 Mohamad Chaarawi 543a8d9d865 [svn-r26005] fix error return value. minor change. 22 Jan 2015 Mohamad Chaarawi 5eee1d7d7e3 [svn-r26002] move checks on reading/writing beyond file eoa outside of the file drivers and into a centralized place in H5FD_read/write.
tested h5committest. 22 Jan 2015 Mohamad Chaarawi a24e3e5c866 [svn-r25994] revert adding the has_mpi_atomicity feature flag and use the has_mpi
flag instead. 21 Jan 2015 Mohamad Chaarawi de47d219c9b [svn-r25993] remove last usage of IS_H5FD_MPIO. 21 Jan 2015 Allen Byrne 21ef17f951a [svn-r25990] Add VFD flush2 depends on flush1 property to test 21 Jan 2015 Allen Byrne 3b742b733b3 [svn-r25987] Use variable instead of hard coded value 20 Jan 2015 Allen Byrne aafac8d7701 [svn-r25986] HDFFV-9060: Changed test folder to use different test folders for VFDs and regular. Needed to set srcdir env var and specify working folder to the folders where all the reference files were copied.
Tested: local linux 20 Jan 2015 Mohamad Chaarawi aac2bb61828 [svn-r25984] change the message flag H5O_MSG_FLAG_FAIL_IF_UNKNOWN to
H5O_MSG_FLAG_FAIL_IF_UNKNOWN_AND_OPEN_FOR_WRITE. Will add a new
H5O_MSG_FLAG_FAIL_IF_UNKNOWN_ALWAYS with the new avoid_truncate patch
coming later.
tested h5committest 20 Jan 2015 Mohamad Chaarawi 1949c40bfdd [svn-r25983] HDFFV-1125: Eliminate IS_H5FD_MPI() macro use in the library and replace with driver feature flag(s).
Add an MPI atomicity feature flag and remove the macro from the library.
tested Parallel on Jam. 20 Jan 2015 Private HDF 234e77b3f94 [svn-r25981] Snapshot version 1.9 release 211 18 Jan 2015 Scot Breitenfeld 485faa47e78 [svn-r25980] Reverting check-in 25978, C_LONG_DOUBLE seems to be 16 bytes sometimes and 10 bytes other times. Not sure why. 15 Jan 2015 Scot Breitenfeld c6cf45e3e70 [svn-r25978] Bug fix for HDFFV-8847
Tested: h5committest 13 Jan 2015 Private HDF d3ddfe842da [svn-r25975] Snapshot version 1.9 release 210 11 Jan 2015 Albert Cheng 0ebac5f3890 [svn-r25971] Update with retirement of AIX 5.3 and addition of AIX 6.1 support. 09 Jan 2015 Mohamad Chaarawi a7e1317c0ae [svn-r26181] fixes for bigio test. 16 Feb 2015 Mohamad Chaarawi de1202bfbac M [svn-r25969] merge from trunk. 09 Jan 2015 Mohamad Chaarawi 50c5f1ab2c7 [svn-r25963] Do not remove the prefix in the chunk alloc file, otherwise it makes
the H5Fcreate fail when prefix is specified.
tested parallel on Jam. 08 Jan 2015 Allen Byrne 5da20c221e2 [svn-r25955] Added Perform and io_timer back into build.
Tested: local linux cmake 05 Jan 2015 Albert Cheng 6a982a7690c [svn-r25954] HDFFV-9046: reorganize hdf5/perform, step 2
Last changes had caused problems with Windows platform:
1. H5private.h in io_timer.h is not accessible in the distributed shared library of tools.
Need to move it to io_timer.c.
2. debug_start_stop_time() would not be available outside of h5perf. Some favor of compiler
does not like it. Screened it out for now.
3. mere "extern" is not good enough for Windows shared library. Must mark them as DLL. Need to mark them as
"H5TOOL... 05 Jan 2015 Allen Byrne 671006a10da [svn-r25953] Comment out printf statement as it caused system resource issues on Windows. Test now executes in 1/10 of time.
Tested: local linux and Windows 05 Jan 2015 Allen Byrne 6b109315f56 [svn-r25951] HDFFV-9054: disable io_timer in tools lib and perform sub-folder due to SHARED compile issues and other issues. 05 Jan 2015 ← Prev Next → require('plugin/commitgraph/network').applyCommits([{id: '85504f53761f96a5903ee176bed25cb3c50d6c54', href: '/users/frank.willmore/repos/hdf5_der/commits/85504f53761f96a5903ee176bed25cb3c50d6c54',parents: [{ id: '595b01658e965b977dd980421cd1bfee27f74dfc' }]},{id: '595b01658e965b977dd980421cd1bfee27f74dfc', href: '/users/frank.willmore/repos/hdf5_der/commits/595b01658e965b977dd980421cd1bfee27f74dfc',parents: [{ id: 'fd79bc3c1ae13f1fad8d3e1f7c26b610a3f5baa3' }]},{id: 'fd79bc3c1ae13f1fad8d3e1f7c26b610a3f5baa3', href: '/users/frank.willmore/repos/hdf5_der/commits/fd79bc3c1ae13f1fad8d3e1f7c26b610a3f5baa3',parents: [{ id: 'b28b5fade93c4e72e045469481cde81c01f956cf' }]},{id: 'b28b5fade93c4e72e045469481cde81c01f956cf', href: 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