[svn-r26743] Purpose: Fix daily test failure
Description:
- In DataType::DataType(const PredType& pred_type), using DataType::copy
will invoke DataType::close() unnecessarily, which will produce undefined
behavior. Changed to call H5Tcopy directly, code reuse is not useful in
this case.
- Also, fixed CommonFG::childObjVersion to return expected value outside of
an if/else block.
Merged from trunk r26737.
Platforms tested:
Linux/ppc64 (ostrich)
Linux/64 (pl...
[svn-r26742] Purpose: Fixed HDFFV-7947 (cont.)
Description:
- Added incRefCount() to other constructors that missed from last time.
- Added default value for H5File::getObjCount and removed its extra version
Platforms tested:
Linux/64 (platypus)
Linux/32 2.6 (jam)
SunOS 5.11 (emu)
[svn-r26741] Description:
Per user Jason Newton request, the following constructor is added:
H5File(hid_t existing_id);
Also, fixed H5File::openFile to close current file first before re-using
the object.
Platforms tested:
Linux/64 (platypus)
Linux/32 2.6 (jam)
SunOS 5.11 (emu)
[svn-r26736] Maintenance: Larry and I updated the Supported Platforms and Tested Configuration Summary sections.
We also verified jam, platypus, loyalty and freedom info in the More Tested Platforms section.
Other flavors of UNIX in the More Tested Platforms section will be checked by Allen.
[svn-r26734] Maintenance: Removed Ubuntu record for dt_arith since it mentioned the old system.
We will need to add the new record since the dt_arith is still failing according to the CDash.
[svn-r26731] Purpose: Fixed HDFFV-7947
Description:
When copy constructor or constructor that takes an existing id is invoked,
the C ref counter stays the same but there is an extra C++ object which
later is destroyed and may cause the HDF5 id to be closed prematurely. The
C++ library needs to increment the ref counter in these situations, so that
the C library will not close the id when it is still being referenced.
However, the incrementing of ref count left some ob...
[svn-r26730] Purpose: Adding new wrappers (HDFFR-9167 partially)
Description:
Added wrappers for C functions H5P[s/g]et_libver_bounds and wrappers
for getting object header version
// Sets bounds on versions of library format to be used when creating
// or writing objects.
void setLibverBounds(H5F_libver_t libver_low, H5F_libver_t libver_high) const;
// Gets the current settings for the library version format bounds.
void getLibverBounds(H5F_libver_t& l...
[svn-r26729] Purpose: Fix bugs
Description:
- Changed DataType::operator= to simply copy the id of rhs instead of
calling H5Tcopy because, when the operator= is invoked, a different
datatype id is created and it won't have the same characteristics as
rhs', specifically, if the rhs represents a named datatype, "this"
would still be a transient datatype.
- Added a DataType constructor that takes a PredType object, and this
constructor will cause H5Tcopy to ...
[svn-r26728] Merge trunk reviwions 26669 and 26670.
Removed from configure.ac VPATH section, LONE_COLON check and checks for redundant addition of /usr/include and /usr/lib to compile flags, with reconfigure.
Tested h5committest
[svn-r26727] Purpose: Fix warnings HDFFV-8658 cont.
Description:
Fixed many type conversion warnings and unused variables.
Merged from trunk r26458, but also combined the fix in r26695 (dsets.cpp)
to avoid test failure, that was undetected before committing to trunk until
r26695.
Platforms tested:
Linux/64 (platypus)
Linux/32 2.6 (jam)
SunOS 5.11 (emu)
[svn-r26726] Purpose: Fix warnings HDFFV-8658
Description: (r26457)
The following two constructors of classes: AbstractDs, IdComponent,
H5Location, and H5Object are no longer appropriate after the data member
"id" had been moved from IdComponent to the sub-classes.
The copy constructors are noop and will be generated by the compilers if
needed so they can be removed in 1.8.15 without effecting applications. The
other constructors will be removed from 1.10 release, an...
[svn-r26723] Purpose: Fixed warnings
Description:
Fixed base classes that were in wrong order on the prototype lines and
some misc. warnings.
Parameter had the same name as the class' member's. Replaced parameter
with a different name.
Missing initializing one of the base classes in multiple inheritance.
Added CommonFG() to constructors' prototype.
Merged from trunk r26454, r26455, and r26456.
Platforms tested:
Linux/64 (platypus)
Linux/32 2.6 (jam)
...
[svn-r26713] Merge r26712 from trunk to v18.
Bug fix: cmakehdf5 broken because zlib is no longer configure in by default.
That broke the testings as some testfiles have zlib compressed datasets.
Added options control to enable the linking of zlib external libarary by
default and turn off the szip library linking as szip library may not be
avaiable. This matches the established settings.
Tested: run cmakehdf5 by hand in jam and platypus.
Also tested in wren but it failed in the testing stag...
[svn-r26709] Port r26690 from trunk to 1.8 branch.
Tested: jam, koala, ostrich (h5committest)
Log from r26690:
Fix error in H5Sextent_copy
When the selection is set to all, H5Sextent_copy did not update the number of
elements in the selection in the destination space. Fixed H5Sextent_copy to do
this. Added tests for this functionality.
Tested: jam, koala, ostrich (h5committest)
[svn-r26708] Port r26301 from trunk to 1.8 branch.
Tested: jam, koala, ostrich (h5committest)
Log from r26633:
Description:
Bring Neil's fix for error in H5S_extent_copy() back to the trunk.
Tested on:
Mac OSX/64 10.10.2 (amazon) w/serial
(h5committest forthcoming)
[svn-r26707] Port r26633 from trunk to 1.8 branch.
Tested: jam, koala, ostrich (h5committest)
Log from r26633:
Add -D_DEFAULT_SOURCE to CPPFLAGS on Linux systems. -D_BSD_SOURCE is deprecated
in recent versions of glibc, and -D_DEFAULT_SOURCE is the replacement. Keep
-D_BSD_SOURCE for now to support older systems. gcc will not issue a warning
about -D_BSD_SOURCE being deprecated when -D_DEFAULT_SOURCE is supplied as well.
Tested: jam, koala, ostrich (h5committest)
[svn-r26706] Merge r26702 of trunk to v18 branch.
HDFFV-8667: h5repack crashes on enumerated 8-bit type nested in compound type.
Description:
The test added failed in some machines because the data file contains infinity values that different machines print them differently as "inf", "INF", "Inf", ...
Solution:
Added a "ignorecase" option to TOOLTEST() to do caseless matching between generated output vs expected output. This solved most machines problem for now.
Tested: h5committest, emu ...
[svn-r26703] Merge of r26392 from trunk.
Adds new memory allocation functions that use the library's
memory allocator. Intended for use with third-party filter
code.
Tested on: h5committest, Solaris (emu), OS X (quail)
Note: emu fails with the existing Inf/inf case problem in
h5dump but no other tests fail.
[svn-r26688] HDFFV-8667: h5repack crashes on enumerated 8-bit type nested in compound type
Fixed and added user provided test file to verify the fix. (Test added to h5dump/testh5dump.sh.in).
Tested: h5committest
[svn-r26681] Merge r26677 from trunk.
HDFFV-8957: h52gif crashes when run against one of our own examples
The tool claimed it could handle 24bit images but there was no code to handle it.
(or might be there were but was removed by previous revisions.)
Also discovered that it does not accept multiple images nor -p for palette
as its user document and online help message indicated.
Solution:
Added code to verify dimension sizes are within 8 bit raster images limit and
added tests to verify ...
[svn-r26676] HDFFV-9201: Create md5s for bzip, gzip and zip files
An md5 checksum is produced for each archive created and stored in the md5 file
Tested: jam by hand.
[svn-r26663] added option to configure support for fortran2003 API.
--enable-fortran2003 | --disable-fortran2003:
enable or disable fortran2003 API. Default is off.
Tested: by hand in platypus.
[svn-r26648] Description:
Bring r26635 from trunk to 1.8 branch:
Bring r26651 from autotools_rework branch to trunk:
Remove the VSNPRINTF_WORKS macro, it's working around bugs in old SGI
& HP compilers.
Tested on:
Linux/32 2.6.18 (jam) w/serial & parallel
(Daily tested on trunk for 2+ days)
[svn-r26638] Description:
Bring r26598 from trunk to 1.8 branch:
Bring r26501 from the autotools_rework branch to the trunk:
Remove ULLONG_TO_LDOUBLE_PRECISION macro/define, as it's targeting bugs
in the FreeBSD and Cygwin compilers.
Tested on:
Linux/32 2.6.18 (jam) w/serial & parallel
(Daily tested on trunk for 2+ days)
[svn-r26637] Description:
Bring r26597 from trunk to 1.8 branch:
Bring r26500 from autotools_rework branch to trunk:
Remove the LLONG_TO_FP_CAST_WORKS macro/define, as it targets problems with
the Visual Studio 6 compilers.
Tested on:
Linux/32 2.6.18 (jam) w/serial & parallel
(Daily tested on trunk for 2+ days)
[svn-r26636] Description:
Bring r26596 from trunk to 1.8 branch:
Bring r26499 from autotools_rework branch to trunk:
Remove ULLONG_TO_FP_CAST_WORKS macro/define, as it only applies to older
platforms we aren't supporting any longer.
Tested on:
Linux/32 2.6.18 (jam) w/serial & parallel
(Daily tested on trunk for 2+ days)
[svn-r26630] Description:
Bring r26595 from trunk to 1.8 branch:
Bring r26494 from autotools_rework branch back to trunk:
Remove the LDOUBLE_TO_UINT_ACCURATE macro/define, it was addressing
problems with older Intel compilers on Linux that are no longer supported.
Tested on:
Linux/32 2.6.18 (jam) w/serial & parallel
(Daily tested on trunk for 2+ days)
[svn-r26628] Description:
Bring r26591 from trunk to 1.8 branch:
Bring r26492 from autotools_rework branch back to trunk:
Remove the FP_TO_ULLONG_ACCURATE and FP_TO_ULLONG_RIGHT_MAXIMUM
macros/defines, which were added to address problems with older PGI
compilers and HP-UX systems and are no longer supported.
Tested on:
Linux/32 2.6.18 (jam) w/serial & parallel)
(Daily tested for 2+ days on trunk)
