[svn-r25033] Purpose:
Merged r24993 from the trunk.
Adds core VFD write tracking functionality. When enabled, the core VFD
will track dirty regions of the file and only write out the changed
regions. The new H5Pget/set_core_write_tracking() API call controls this
feature. A new "core_paged" VFD target was added to the check-vfd target
in test/Makefile.am that runs all tests with the new write tracking
functionality.
Tested on:
32-bit LE linux (jam)
64-bit ...
[svn-r25031] Purpose: Fix HDFFV-8737
Description:
- Fixed a few comments that Doxygen gave warnings on.
- Updated configuration file for Doxygen.
- Removed stylesheet from configuration so Doxygen will use the default
stylesheet and removed the CLANG-related lines to eliminate another
error since we're not using that feature, so the lines should not
present. (from cpp_doc_config)
- Added missing images
(merged from trunk-r24996 and r25019)
Platforms...
[svn-r25023] Description:
- Added wrappers to H5Object for H5Iget_name() to get object's name
ssize_t getObjName(char *obj_name, size_t buf_size = 0) const;
ssize_t getObjName(H5std_string& obj_name, size_t len = 0) const;
H5std_string getObjName() const;
- Added tests tobject.cpp
- Added to various cleanup_* functions in tests to remove generated files
- Added an overload H5I_type_t getHDFObjType() to get object's type
(merge from trunk-24969)
Plat...
[svn-r25022] Purpose: Code improvement
Description:
- Overloaded Atribute::getName to take a char* for the attribute name:
ssize_t Attribute::getName(char* attr_name, size_t buf_size)
- Switched the arguments in this function:
ssize_t getName(size_t buf_size, H5std_string& attr_name)
so it became:
ssize_t getName(H5std_string& attr_name, size_t buf_size)
The second argument is default to 0, and can be skipped.
- Removed this function:
...
[svn-r25018] Purpose:
Merged r24893, r24961, r24965 from trunk.
Fix for thread-local storage resource leaks on Windows with Win32 threads.
Prohibits thread-safe + C++/Fortran/static library in CMake.
Tested on:
64-bit Windows 7 w/ Visual Studio 2012
[svn-r25017] Merge r24997 changes from trunk.
Added compiler versions for mpich to settings file and configure summary.
For make installcheck, compile and run installed examples using the installed scripts. They
were being compiled but not run.
Add Fortran2003 examples to the run-ex-fortran script when fortran2003 is enabled.
Set flag to -O3 in production mode for Intel compilers other than those with specified other settings.
Gentoo patches:
Remove unnecessary setting of LD_LIBRA...
[svn-r25016] Purpose:
Merged r24857 from the trunk.
Changes to configure.ac so that --with-pthreads is not required
when the --enable-threadsafe configure option is set as long as
the Pthreads library is in a standard location.
Tested on:
32-bit LE linux (jam) with --enable-threadsafe
64-bit LE linux (koala) with --enable-threadsafe
64-bit BE linux (ostrich) with --enable-threadsafe
[svn-r25014] Purpose:
Merge of r24937 from the trunk
Adds H5free_memory to the API. This function should be used to free
memory allocated by the library (e.g., returned values from
H5Tget_tag, H5Pget_class_name, etc.).
This is mainly to help Windows applications deal with multiple CRT
instances, but can also be helpful when a debug memory manager is
being used or when the HDF5 API is being wrapped for managed languages
like Python and Java.
Tested on:
32...
[svn-r25013] Purpose:
Merge of r24416 from the trunk
Fixes a number of compiler warnings in the dsets test.
Tested on:
32-bit LE linux (jam) - very minor changes, mostly casts
[svn-r25000] Bugfix: HDFFV-8639
h5diff segfaults with user's files
Solution:
Added a variable to indicate if real data are in the buffer and will call H5Dvlen_reclaim()
only when real data are in the buffer.
Tested: with the user provided data files and no more segmentaion fault.
Also h5committ tested.
[svn-r24990] Problem:
AIX compiler complains that:
ex_ds1.f90, line 89.16: 1512-050 (W) Field separator is missing, in literal FMT specifier, after edit descriptor X. A comma is assumed.
Line 89:
WRITE(*,'(/,5X 3(A,1X),I0,A,L1)') 'Is',TRIM(DS_1_NAME),&
Solution:
Added the missing comma after "5X".
Tested:
AIX system.
[svn-r24930] Merged changes in the trunk to the branch,
svn merge -r24650:24929 https://svn.hdfgroup.uiuc.edu/hdf5/trunk/fortran .
tested: jam (intel, pgi, gnu)
[svn-r24913] Purpose: Fix HDFFV-8642
Description:
Added CompType::setSize(size_t size) to set size for compound data type
as H5Tset_size had been changed.
Merged from trunk-24912
Platforms tested:
Linux/ppc64 (ostrich)
Linux/32 2.6 (jam)
SunOS 5.11 (emu)
[svn-r24894] Description:
Bring r24869 & r24875 from trunk to 1.8 branch:
Clean up more compiler warnings, plus merge a few Coverity bug fixes from
the hdf5_1_8_coverity branch back to the trunk:
r20877:
Purpose: Fix coverity issue 1723
Description:
Modified test_generate in hl/test_image to close file "f" before exit, even if
an error occurs.
r20879:
Issue 63: change check of return of H5Tget_nmembers to <=0. No need to go
futher if call fails as well as empty.
r20881:
Coverity ...
[svn-r24878] Description:
Bring r24864 from trunk to 1.8 branch:
Remove all traces of MPI-POSIX VFD and GPFS detection/code.
Remove remaining traces of stream VFD.
Remove testpar/t_posix_compliant test (it's not actually verifying anything).
Clean up H5D__mpio_opt_possible() further.
Moved environment variable that disables MPI collective operations into
MPI-IO VFD (instead of it being in src/H5S.c).
A few other small code cleanups.
Tested on:
Mac OS...
[svn-r24870] Description:
- Added another overload for char* argument:
ssize_t getComment(const char* name, const size_t buf_size, char* comment)
- Changed default value to 0 for the other two getComment methods
- Added HDmemset to after every char string allocation to clear the buffer
- Added a null terminator to the comment returned from the C call, in
getComment methods
- Some minor cleanup
Merged from trunk: -r24865 -r24867
Platforms tested:
Lin...
[svn-r24868] Purpose: Applied user patch, HDFFV-8623
Description:
Applied patch from user Jason Newton. JIRA issue HDFFV-8623, patch
0009, improve c++ compatibility with exceptions. All additions of "throw()"
are included. Exception::what() is not added because it is not necessary.
It was suggested for the name, which follows stdlib.
Merged from trunk -r24830
Platforms tested:
SunOS 5.11 (emu)
Linux/32 2.6 (jam)
Linux/64 2.6 (koala)/PGI compilers
[svn-r24810] Description:
Bring r24803 & r24804 from trunk to 1.8 branch:
r24804:
Brought changes from Coverity branch back to trunk, and cleaned up misc.
other warnings & formatting issues:
r20833:
Fixed Coverity 667 and 668 with real integer overflow tests this time.
r20834:
Use HDstrncpy and HDstrncat. --gh
r20835:
Change to use strncpy - use base_len + 1 for line 156, use HDstrlen(path) + 1 for line 159
r20836:
Fixed coverity 585 by casting output o...
[svn-r24794] Port r24757 from trunk to 1.8 branch.
Tested: ostrich, platypus (h5committest, apparent system issue on jam and koala)
Log from r24635:
Change assertion to condition check/error return. Should fix periodic
assertion failure in fheap test (in test that is expected to fail cleanly).
Fix typo in H5detect.c
Tested: ostrich, platypus (h5committest - jam and koala having issues)
[svn-r24785] Description:
Bring r24769 & r24772 from trunk to 1.8 branch:
Check in Mohamad's changes to support collective I/O on point selections,
along with some other minor cleanups.
Correct some dynamically sized arrays that fail on Windows.
Tested on:
Mac OSX/64 10.9.2 (amazon) w/parallel
(And has been through the daily test regime on the trunk)
