Author Commit Message Commit Date Jordan Henderson 2de2112cf6d Remove note about src_type_size vs dst_type_size 09 Feb 2017 Jordan Henderson 5610256c720 Trigger error if library tries to break to independent I/O with filters
in the pipeline 08 Feb 2017 Jordan Henderson ce5e3030502 Fix issue in H5D__mpio_array_gather when no one contributes anything
Fix issue in Multi-chunk IO where IO would crash if no one has a
selection 03 Feb 2017 Jordan Henderson 09469dfd55c Iterator for initial chunk entry IO operation should use source datatype
size 03 Feb 2017 Jordan Henderson b458565918a Fix bug where data doesn't write correctly when MEMSPACE isnt the same
as FILESPACE 03 Feb 2017 Jordan Henderson af3227fe4ea Check return value of H5S_GET_EXTENT_NPOINTS macro
Fix bug where a process with no selection during Multi-chunk IO could
cause other processes to copy back incorrect chunk information after
chunk re-allocation 02 Feb 2017 Jordan Henderson 3ccc4f7ab3d Fix macro complaint in H5Dmpio.c
Fix debugging file output for test suite 02 Feb 2017 Jordan Henderson 3f447095787 Test code for user passing one-chunk-per-process hint to library 31 Jan 2017 Jordan Henderson f7cef1b7684 Implement realloc strategy when receiving data modification messages 31 Jan 2017 Jordan Henderson 4e6eb3ffe9d Add minor error code for H5D__mpio_array_gather failures
Catch case where total IO size is greater than chunk size (Overlapping
write)
Update full chunk overwrite code to not need MPI calls 30 Jan 2017 Jordan Henderson 16507a763af Add mechanism for determining if a chunk is being fully overwritten 30 Jan 2017 Jordan Henderson 79220e9665a Add back debugging statements
Move conditional check inside while loop in
construct_filtered_io_info_list 30 Jan 2017 Jordan Henderson 5ed72c3d413 Remove Debugging Statements for Code Review 27 Jan 2017 Jordan Henderson 0a937597741 Remove unnecessary num_chunks_selected_array from
H5D__construct_filtered_io_info_list 27 Jan 2017 Jordan Henderson 344781f17d9 Multiple Bug Fixes
Add comments explaining different variables
Check more overflow/conversion sign change issues 26 Jan 2017 Jordan Henderson 0b6016a3fc6 Fix bug with chunk data updating 25 Jan 2017 Jordan Henderson aab742c9a2f Test code for sending chunk modification data around 24 Jan 2017 Jordan Henderson b19b0ea67d5 Clean up H5Dmpio.c warnings 20 Jan 2017 Jordan Henderson 5426599c91d For sake of complexity, force multi chunk IO for parallel filtered read 19 Jan 2017 Jordan Henderson 740e85a82dc Code refactoring
Modify single chunk entry function to handle both read and write cases
Store array of MPI derived types in Multi-chunk IO so that all freeing
can be done at end instead of during processing
Add read support for Multi-chunk IO only currently 19 Jan 2017 Jordan Henderson 2c8bddb4ab0 Clean up const and other warnings
Add notes about need for another minor error code 18 Jan 2017 Jordan Henderson 9bb49c6b056 Update documentation for link and multi chunk IO 18 Jan 2017 Jordan Henderson 4a83ceaf7d7 Major cleanup
Separate update phase for chunk entry into its own function, since code
for multi-chunk IO and link-chunk IO is exactly the same
Remove last IO mode code from multi-chunk IO, since filtered collective
writes cannot break to independent IO mode
Fix collective overlapping IO for multi-chunk IO by iterating equal to
the max number of chunks on any process
Make hard separation between collective read and write since trying to
mix the two into one loop becomes messy
Add prelimin... 18 Jan 2017 Jordan Henderson 349b3634f73 Add chunk redistribution for shared chunks
Remove check for process having a selection as this needs to be reworked 17 Jan 2017 Jordan Henderson 2292a8520df Eliminate owner field
Work on redistributing shared chunks 13 Jan 2017 Jordan Henderson a3605cbdeb5 Switch working branch from master to develop 13 Jan 2017 Allen Byrne 89f65fc97ee HDFFV-9774 Add enable-error-stack argument to h5diff 31 Aug 2017 Quincey Koziol 949649a2b6e Correct mistake in H5_now_usec calculation for clock_gettime. 24 Sep 2017 Quincey Koziol 395473b2f4b Remove detection for mach/mach/time.h, since we're no longer using the
time routines from that header. 23 Sep 2017 Quincey Koziol e70dc43d6bf Update H5_now_usec to prefer using clock_gettime. 23 Sep 2017 Quincey Koziol 6718b90009d M Merge remote-tracking branch 'origin/develop' into monotonic_timer 03 Sep 2017 Allen Byrne abcf30f2329 M Merge pull request #648 in HDFFV/hdf5 from ~BYRN/hdf5_adb:develop to develop
* commit '073f52424766cc4a8ac9d56966cb58c054ce3801':
HDFFV-10284 Add VS2017 support 31 Aug 2017 Allen Byrne 073f5242476 HDFFV-10284 Add VS2017 support 31 Aug 2017 Allen Byrne f5275af71ac M Merge pull request #644 in HDFFV/hdf5 from ~BYRN/hdf5_adb:develop to develop
* commit '61bdee1ff77a5db47ce8a88ce7e3c83e58123236':
HDFFV-10282 refactor out assert calls in tools 31 Aug 2017 Allen Byrne 61bdee1ff77 M Merging in latest from upstream (HDFFV/hdf5:refs/heads/develop)
* commit '289007567e6ab5e0893af787b1870f27f10644c7':
Add commentary around calling H5Screate_simple with a single element
Miscellaneous improvements (cont.) Description: Put back H5Location::getNumObjs and marked as deprecated in favor of Group::getNumObjs. Platforms tested: Linux/32 2.6 (jam) Darwin (osx1010test)
Miscellaneous improvements Description: Moved H5Location::getNumObjs to Group::getNumObjs ... 29 Aug 2017 Allen Byrne b82ba32275f HDFFV-10282 refactor out assert calls in tools 23 Aug 2017 Quincey Koziol d5c3ec8b932 Changes to make timers within the library monotonic. 03 Sep 2017 Barbara Jones 289007567e6 M Merge pull request #642 in HDFFV/hdf5 from ~BMRIBLER/hdf5_bmr_cpp3:develop to develop
* commit '883a235d5ca81770228c5cb5f9d162afda0b411f':
Miscellaneous improvements (cont.) Description: Put back H5Location::getNumObjs and marked as deprecated in favor of Group::getNumObjs. Platforms tested: Linux/32 2.6 (jam) Darwin (osx1010test)
Miscellaneous improvements Description: Moved H5Location::getNumObjs to Group::getNumObjs (i.e., H5Gget_info) Switched reinterpret_cast... 29 Aug 2017 Binh-Minh Ribler 883a235d5ca Miscellaneous improvements (cont.)
Description:
Put back H5Location::getNumObjs and marked as deprecated in favor of
Group::getNumObjs.
Platforms tested:
Linux/32 2.6 (jam)
Darwin (osx1010test) 25 Aug 2017 Binh-Minh Ribler f4c4ab678b1 M Merge branch 'develop' of https://bitbucket.hdfgroup.org/scm/~bmribler/hdf5_bmr_cpp3 into develop 24 Aug 2017 Binh-Minh Ribler 0e44181bbb9 Miscellaneous improvements
Description:
Moved H5Location::getNumObjs to Group::getNumObjs (i.e., H5Gget_info)
Switched reinterpret_cast to static_cast in H5Object::iterateAttrs
Miscellaneous cleanup
Platforms tested:
Linux/32 2.6 (jam)
Linux/64 (platypus)
Darwin (osx1010test) 24 Aug 2017 Richard Warren dfdf09f2a13 M Merge pull request #635 in HDFFV/hdf5 from GreaterThan-2GB-MPIO to develop
Added some commentary on the fact that 32 bit compilers appear to require actual array arguments to call H5Screate_simple rather than a pointer to a single size_t element.
* commit '22baab211d912f1012057b3a7ae217abd2a44a38':
Add commentary around calling H5Screate_simple with a single element
Fix the t_bigio test so that it runs on 32bit machines 28 Aug 2017 Richard Warren 22baab211d9 Add commentary around calling H5Screate_simple with a single element 28 Aug 2017 Richard Warren f84af6ecc6e Fix the t_bigio test so that it runs on 32bit machines 15 Aug 2017 Vailin Choi 593e4038b3a M Merge pull request #641 in HDFFV/hdf5 from ~VCHOI/my_hdf5_fork:develop to develop
* commit '268f01fd477e0474fa5727a47abef214a5e4293b':
Fix for daily test failure Fix for the compilation error from the PGI compiler. 24 Aug 2017 Vailin Choi 268f01fd477 M Merge branch 'develop' of https://bitbucket.hdfgroup.org/scm/~vchoi/my_hdf5_fork into develop 24 Aug 2017 Vailin Choi f3b72e1bde7 M Merge pull request #637 in HDFFV/hdf5 from ~VCHOI/my_hdf5_fork:develop to develop
* commit '1ef8577a4aaaa4120a819ff36747fdca99abdc26':
Modifications based on comments from pull request review (1) Remove unnecessary asserts (2) Add code to insert bad offset values to the test file in gen_bad_offset.c
Fix for HDFFV-10216 segfault in H5G_node_cmp3 with corrupt h5 file Fix H5HL_offset_into() to return error when offset exceeds heap data block size. Also fix other places that call this routin... 23 Aug 2017 Allen Byrne 1b647b18fee M Merge pull request #639 in HDFFV/hdf5 from ~BYRN/hdf5_adb:develop to develop
* commit '678c3ae1535b9b3b9faa53bc48250f1635778dd7':
HDFFV-10188 force non-native type description
HDFFV-10188 emu insists on printing non-native description 23 Aug 2017 Allen Byrne 678c3ae1535 HDFFV-10188 force non-native type description 23 Aug 2017 Allen Byrne d200cd31a79 HDFFV-10188 emu insists on printing non-native description 23 Aug 2017 ← Prev Next → require('plugin/commitgraph/network').applyCommits([{id: '2de2112cf6dd2557d81e1a71cea0b61e2ced57aa', href: '/users/frank.willmore/repos/hdf5_der/commits/2de2112cf6dd2557d81e1a71cea0b61e2ced57aa',parents: [{ id: '5610256c7202ae4c0001d439db3c295b2e1d6a1c' }]},{id: '5610256c7202ae4c0001d439db3c295b2e1d6a1c', href: '/users/frank.willmore/repos/hdf5_der/commits/5610256c7202ae4c0001d439db3c295b2e1d6a1c',parents: [{ id: 'ce5e3030502f2ed0f09aad12168635f635444d70' }]},{id: 'ce5e3030502f2ed0f09aad12168635f635444d70', href: '/users/frank.willmore/repos/hdf5_der/commits/ce5e3030502f2ed0f09aad12168635f635444d70',parents: [{ id: '09469dfd55cacb0242e1d7a181500ef08c83743e' }]},{id: '09469dfd55cacb0242e1d7a181500ef08c83743e', href: 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