Jayesh Krishna 9a4d1460752 Adding a target and custom doxygen configuration file to build documentation. The documentation can now be built using 'make doc' 17 Dec 2014 Jim Edwards a2f153b0f72 fix inconsistancy in openfile 16 Dec 2014 Jim Edwards 609cb8d31d1 fix fallout from documentation changes 15 Dec 2014 Jim Edwards bac54da673a working on documentation 15 Dec 2014 Jim Edwards 32da3130c6c do not set count to 1 if type is MPI_DATATYPE_NULL 12 Dec 2014 Jim Edwards c46f5c3c51a rework cmake stuff a little 10 Dec 2014 Jim Edwards 4ac57b00c8d update cmake external 10 Dec 2014 Jim Edwards e21dc1adfc6 fix bug in pioperformance.F90 wrong number of iotasks 10 Dec 2014 Jim Edwards 5b84f64d457 handle case without pnetcdf 10 Dec 2014 Jim Edwards f4785aa61ed added test for pnetcdf varn functions 09 Dec 2014 Jim Edwards 5679b89d7a4 update pnetcdf path on yellowstone 09 Dec 2014 Jim Edwards 8fe5e719b4a better results on mira now 08 Dec 2014 Jim Edwards a5620c4a209 updates from cetus testing 08 Dec 2014 Jim Edwards 4ed0068c020 changes from mira 03 Dec 2014 Jim Edwards b54263bea0c remove some debug flags make PIO_iotask_rank a function 02 Dec 2014 Jim Edwards 38fc2dd97e2 add dash 25 Nov 2014 Jim Edwards 82883d9fe0b nightly build yellowstone work 25 Nov 2014 Jim Edwards b2d93261a12 fix issue with maxiobuflen calculation 25 Nov 2014 Jayesh Krishna 7177a5e2209 Changing the order of iotypes returned by the PIO util functions to reflect the priority in testing the iotypes. The iotypes are now returned in a list with decreasing order of priority. e.g. pNetCDF is now getting tested before NetCDF iotype. 25 Nov 2014 Jayesh Krishna dc69bfde183 Adding full path to the test programs instead of relative paths. Without this fix the BGQ runjob script is unable to find the test executable when ctest is run from the cmake build root directory 24 Nov 2014 Jayesh Krishna a85a643c46e Changing the print from a statement to a function so that it is compliant with python 3 syntax 24 Nov 2014 Jim Edwards 676e8f854a2 still trying 22 Nov 2014 Jim Edwards 4f97573e6ab still trying 22 Nov 2014 Jim Edwards 62b8d41de69 still trying 22 Nov 2014 Jim Edwards f5de21e0a6a move module initialize into builder 22 Nov 2014 Jim Edwards c8260cab71f now get it working from cron 22 Nov 2014 Jim Edwards d826f77f87f update externals 22 Nov 2014 Jim Edwards 52023a21764 all tests pass on yellowstone now 22 Nov 2014 Jim Edwards c009eebed75 works on goldbach 22 Nov 2014 Jim Edwards 16d1cfc1db0 update externals to trunk for testing 22 Nov 2014 Jim Edwards d04e4c2d225 another fix 22 Nov 2014 Jim Edwards 110779f014e fix goldbach build 22 Nov 2014 Jim Edwards 31aa8e715de working on mira (again) 22 Nov 2014 Jim Edwards 78ee5c37729 still working on build 22 Nov 2014 Jim Edwards 79dc400bba3 add mpilib to dictionary 22 Nov 2014 Jim Edwards fb462a87da7 try this on mira 22 Nov 2014 Jim Edwards ba32d19027e trying to get the build right on mira(cetus) 22 Nov 2014 Jayesh Krishna 1025267fb45 Adding timeouts to the PIO tests. This change uses a newer version of CMake_Frtran_utils that allows timeouts for MPI tests 21 Nov 2014 Jayesh Krishna f041361f5c6 Making sure that we use runjob to run tests on Cetus 21 Nov 2014 Jim Edwards 2871ef06c7a fix some tests on yellowstone 21 Nov 2014 Jim Edwards b6c1b26272e updates from mira 21 Nov 2014 Jim Edwards 32a38f46a84 start nightly builds on goldbach 20 Nov 2014 Jim Edwards 1699ef0ef8c update nightly builder 20 Nov 2014 Jim Edwards 935cebac99a clean up debug stuff 20 Nov 2014 Jim Edwards d10f2dc76a7 the problem was the timestamp directory 20 Nov 2014 Jim Edwards 53ced5637cb try this 20 Nov 2014 Jim Edwards 614c0aaf16c another meaningful message 20 Nov 2014 Jim Edwards 4ee7f1bc98f try again 20 Nov 2014 Jim Edwards 119bc6b4203 try agaiin 20 Nov 2014 Jim Edwards 5a77db9e1af update externals 20 Nov 2014