! ************************************************************ ! ! This example shows how to create a chunked dataset. The ! program first writes integers in a hyperslab selection to ! a chunked dataset with dataspace dimensions of DIM0xDIM1 ! and chunk size of CHUNK0xCHUNK1, then closes the file. ! Next, it reopens the file, reads back the data, and ! outputs it to the screen. Finally it reads the data again ! using a different hyperslab selection, and outputs ! the result to the screen. ! ! This file is intended for use with HDF5 Library verion 1.8 ! ! ************************************************************ PROGRAM main USE HDF5 IMPLICIT NONE CHARACTER(LEN=18), PARAMETER :: filename = "h5ex_d_chunk.h5" CHARACTER(LEN=3) , PARAMETER :: dataset = "DS1" INTEGER , PARAMETER :: dim0 = 6 INTEGER , PARAMETER :: dim1 = 8 INTEGER , PARAMETER :: chunk0 = 4 INTEGER , PARAMETER :: chunk1 = 4 INTEGER :: hdferr INTEGER :: layout INTEGER(HID_T) :: file, space, dset, dcpl ! Handles INTEGER(HSIZE_T), DIMENSION(1:2) :: dims = (/dim0, dim1/), chunk = (/chunk0,chunk1/) INTEGER(HSIZE_T), DIMENSION(1:2) :: start, stride, count, block INTEGER, DIMENSION(1:dim0, 1:dim1) :: wdata, & ! Write buffer rdata ! Read buffer INTEGER :: i, j ! ! Initialize FORTRAN interface. ! CALL h5open_f(hdferr) ! Initialize data to "1", to make it easier to see the selections. ! wdata = 1 ! ! Print the data to the screen. ! WRITE(*, '(/,"Original Data:")') DO i=1, dim0 WRITE(*,'(" [")', ADVANCE='NO') WRITE(*,'(80i3)', ADVANCE='NO') wdata(i,:) WRITE(*,'(" ]")') ENDDO ! ! Create a new file using the default properties. ! CALL h5fcreate_f(filename, H5F_ACC_TRUNC_F, file, hdferr) ! ! Create dataspace. Setting maximum size to be the current size. ! CALL h5screate_simple_f(2, dims, space, hdferr) ! ! Create the dataset creation property list, and set the chunk ! size. ! CALL h5pcreate_f(H5P_DATASET_CREATE_F, dcpl, hdferr) CALL h5pset_chunk_f(dcpl, 2, chunk, hdferr) ! ! Create the chunked dataset. ! CALL h5dcreate_f(file, dataset, H5T_STD_I32LE, space, dset, hdferr, dcpl) ! ! Define and select the first part of the hyperslab selection. ! start = 0 stride = 3 count(1:2) = (/2,3/) block = 2 CALL h5sselect_hyperslab_f (space, H5S_SELECT_SET_F, start, count, & hdferr, stride, block) ! ! Define and select the second part of the hyperslab selection, ! which is subtracted from the first selection by the use of ! H5S_SELECT_NOTB ! block = 1 CALL h5sselect_hyperslab_f (space, H5S_SELECT_NOTB_F, start, count, & hdferr, stride, block) ! ! Write the data to the dataset. ! CALL h5dwrite_f(dset, H5T_NATIVE_INTEGER, wdata, dims, hdferr, file_space_id=space) ! ! Close and release resources. ! CALL h5pclose_f(dcpl , hdferr) CALL h5dclose_f(dset , hdferr) CALL h5sclose_f(space, hdferr) CALL h5fclose_f(file , hdferr) ! ! Now we begin the read section of this example. ! ! ! Open file and dataset using the default properties. ! CALL h5fopen_f(filename, H5F_ACC_RDONLY_F, file, hdferr) CALL h5dopen_f (file, dataset, dset, hdferr) ! ! Retrieve the dataset creation property list, and print the ! storage layout. ! CALL h5dget_create_plist_f(dset, dcpl, hdferr) CALL h5pget_layout_f(dcpl, layout, hdferr) WRITE(*,'(/,"Storage layout for ", A," is: ")', ADVANCE='NO') dataset IF(layout.EQ.H5D_COMPACT_F)THEN WRITE(*,'("H5D_COMPACT_F",/)') ELSE IF (layout.EQ.H5D_CONTIGUOUS_F)THEN WRITE(*,'("H5D_CONTIGUOUS_F",/)') ELSE IF (layout.EQ.H5D_CHUNKED_F)THEN WRITE(*,'("H5D_CHUNKED_F",/)') ELSE IF (layout.EQ.H5D_VIRTUAL_F)THEN WRITE(*,'("H5D_VIRTUAL_F",/)') ELSE WRITE(*,'("Layout Error",/)') ENDIF ! ! Read the data using the default properties. ! CALL h5dread_f(dset, H5T_NATIVE_INTEGER, rdata, dims, hdferr) ! ! Output the data to the screen. ! WRITE(*, '("Data as written to disk by hyberslabs:")') DO i=1, dim0 WRITE(*,'(" [")', ADVANCE='NO') WRITE(*,'(80i3)', ADVANCE='NO') rdata(i,:) WRITE(*,'(" ]")') ENDDO ! ! Initialize the read array. ! rdata = 0 ! ! Define and select the hyperslab to use for reading. ! CALL h5dget_space_f(dset, space, hdferr) start(1:2) = (/0,1/) stride = 4 count = 2 block(1:2) = (/2,3/) CALL h5sselect_hyperslab_f (space, H5S_SELECT_SET_F, start, count, & hdferr, stride, block) ! ! Read the data using the previously defined hyperslab. ! CALL h5dread_f(dset, H5T_NATIVE_INTEGER, rdata, dims, hdferr, file_space_id=space) ! ! Output the data to the screen. ! WRITE(*, '(/,"Data as read from disk by hyperslab:")') DO i=1, dim0 WRITE(*,'(" [")', ADVANCE='NO') WRITE(*,'(80i3)', ADVANCE='NO') rdata(i,:) WRITE(*,'(" ]")') ENDDO ! ! Close and release resources. ! CALL h5pclose_f(dcpl , hdferr) CALL h5dclose_f(dset , hdferr) CALL h5sclose_f(space, hdferr) CALL h5fclose_f(file , hdferr) END PROGRAM main