[svn-r15458] Purpose: Modify the library to take the proper action when files with incorrect datatype versions are encountered.Description: The library now recognizes some problems with datatype versions in
H5O_decode_helper(), and, if not performing strict format checks, automatically
corrects them. Framework added for other message decode routines to
automatically correct file errors. Datatype version information added to
h5debug.
Tested: kagiso, smirom, linew (h5committest)
[svn-r15457] Description: Added notes about:
- bugzilla 1068: revising class hierarchy to move Attribute out.
- replacing IdComponent::dereference with new H5Object member functions
and constructors in various other classes.
[svn-r15451] Purpose: Fix various problems that were occurring when using mounted files.Description:
Moved mount table from top file structure to shared file structure. Moved
parent out of mount table and back into top file structure. Mounted files can
now be accessed from any handle of the parent file. Changes to how files are
closed. Stricter cycle checking on mounted files. Removed unused function
H5F_has_mount().
Tested:
committest in 1.8 branch. Committing now due to t...
[svn-r15440] Purpose: Correct a few typos from my previous editDescription:
-- Remove a couple lines of debugging output
-- Make sure H5_PACKAGE_NAME outputs 'HDF5' rather than 'hdf5'
-- Take into account version strings with a postfix. This isn't currently used in HDF5 1.9 branch, but is in HDF5 1.8.
Tested:
kagiso
[svn-r15439] Add the following patch === The following patch to h5copy.c on or near line 173 makes the tool substantially more useful... *flag = (*flag) | fla; Because the command-line option parsing permits multiple '-f' arguments, this will have the effect of or'ing the flags together so one can do someting like....~/tmp/hdf5-1.8.1/tools/h5copy/h5copy -i multi_ucd3d.h5 -s block5 -o gorfo -d foo -f shallow -f soft
Mark C. Miller, Lawrence Livermore National Laboratory
email: mailto:miller86@llnl.gov
===
[svn-r15438] Purpose: Bring the Windows H5pubconf.h up-to-dateDescription:
This commit is a major update to the Windows-maintained H5pubconf.h file. This file is statically-distributed because Windows cannot generate it dynamically as other platforms do. Previously, our Windows version contained a minimal subset of the macro definitions required. To update, I've gone through each macro (based on kagiso's output), and tested for the correct value on Win...
[svn-r15430] Purpose: Update Windows test script for new h5diff option: -cDescription:
A new parameter was added to h5diff recently. We add a new test to the h5diff script, and change the syntax in which h5diff is called from the h5repack test script
Tested:
VS2005 on WinXP
[svn-r15428] http://bugzilla.hdfgroup.uiuc.edu/show_bug.cgi?id=1170Summary: when using h5diff to compare the results of h5repack (or other tools that copy one HDF5 file to another), a new option is needed to allow h5diff to make an "absolute" comparison of the 2 files. This is the "contents" mode explained in the usage below.
If this mode is present, objects in both files must match (must be exactly the same). If this does not happen, the tool returns an erro...
[svn-r15421] bug fix the parsing of the command line strings for the shared object header message type was not being done correctly (strcmp) fix: substituted by strncmptested: windows, linux
[svn-r15420] Description:Initialized a string with a space instead of a blank
i.e. var = '' is now var = ' '
This fixes a problem with AIX for bug 1252
[svn-r15418] Description:Added missing comma, i.e.
WRITE(*, "("" subroutine i"" i2.2,""()"")") j
should be
WRITE(*, "("" subroutine i"", i2.2,""()"")") j
etc...
as noted in bug 1251 and NAG compiler.
Checked the write fix using Sun f95, g95, pgf90, gfortran, ifort, absoft and all gave the correct write output.
[svn-r15408] Purpose: Enable testDescription:
The daily test failure caused by the C++ API was fixed, so put
the packet table test back.
Platforms tested:
SunOS 5.10 (linew)
Linux 2.6 (kagiso)
FreeBSD (duty)
[svn-r15407] Purpose: Fix bugDescription:
Changed all subclasses' setId to protected p_setId and put back setId
in IdComponent. p_setId is used in the library where the id provided
by a C API passed on to user's application in the form of a C++ API
object, which will be destroyed properly, and so p_setId does not
call incRefCount. On the other hand, the public version setId is
used by other applic...
[svn-r15395] When an attribute was opened twice and data was written with one of the handles, the file didn't have the data. It happened because each handle had its own object structure, and the empty one overwrote the data with fill value. This is fixed by making some attribute information like the data be shared in the attribute structure.Tested on smirom, kagiso, and linew.
[svn-r15383] bug fix: when a requested palette index did not exist , the verbose printing message was referring to the default palettetested: windows, linux
[svn-r15367] Description: Add check to avoid mounting the a file on a group twice, then the mounts are done on the same HDF5 file, but opened with separate H5Fopen calls. Also add new 'mounted' flag to the H5G_info_t struct, queried with the
H5Gget_info() API call, to allow applications to detect and avoid this
situation.
This probably fixes Bz#1070 also, I'll check with Dan Anov (who reported
a different sort of behavior, but seems to have the same underlying problem).
Tested on:
Mac OS X/32 10.5.4 (amazon)
Linux/64 2.6 (chicago)
[svn-r15364] Convert the HDF5 8bit images to jpeg 24bit truecolor. Add an option for conversion from HDF5 indexed image to jpeg true color and an option to use a specific palette in the conversion.tested: windows, linux
[svn-r15335] Fixed incorrect error message in H5Pset_fletcher32: "unable to add deflate filter to pipeline" -> "unable to add fletcher32 filter to pipeline"Tested: kagiso
[svn-r15324] Purpose: Update h5jam Windows test for new testfiles directoryDescription:
The testfiles directory moved, so we need to update test script on Windows. This should fix the Windows daily-test errors from the weekend.
Tested:
VS2005 on WinXP
[svn-r15312] Purpose: Support Visual Studio 2008 on WindowsDescription:
Write documentation for building HDF5 with the latest version of Visual Studio, 2008. The process is very similar to building with Visual Studio 2005, but with an automatic project-file conversion beforehand.
Also adapt commandline build scripts for Visual Studio 2008 as well.
Tested:
VS2008 on WinXP
[svn-r15311] added removal of more special characters from jpeg file nameadded a command line option -c to convert the output image to true or gray color
[svn-r15309] Purpose: Fixed bugsDescription:
The class hierarchy was revised to address the problem reported in
bugzilla #1068. Classes AbstractDS and Attribute are moved out of
H5Object. Class Attribute now multiply inherits from IdComponent and
AbstractDs and class DataSet from H5Object and AbstractDs.
In addition, data member IdComponent::id was moved into subclasses:
Attribute, DataSet, DataSpac...
[svn-r15308] Purpose: Fixed bugsDescription:
The class hierarchy was revised to address the problem reported in
bugzilla #1068. Classes AbstractDS and Attribute are moved out of
H5Object. Class Attribute now multiply inherits from IdComponent and
AbstractDs and class DataSet from H5Object and AbstractDs.
In addition, data member IdComponent::id was moved into subclasses:
Attribute, DataSet, DataSpac...
Neil Fortner
Binh-Minh Ribler
Private HDF
Pedro Vicente Nunes
Scott Wegner
Peter Cao
Scot Breitenfeld
Christian Chilan
Raymond Lu
Quincey Koziol
Vailin Choi