Author Commit Message Commit Date Jordan Henderson 510fb32f940 Add internal async support for map put, get val, delete key and exists
Fix invalid memory read on failure in a map test 07 Jul 2020 Neil Fortner 60a34863368 M Merge pull request #135 in HDF5VOL/daos-vol from ~NFORTNE2/daos-vol:async_link_obj to master
* commit 'cfcac9b7b542fee379ac64e80aa582b8573ba58b': (22 commits)
Fix typos in link deletion ref count decrement.
Add support to H5Ldelete for decrementing the target object's ref count, deleting the object if it drops to 0.
Implement full async support for H5Ocopy. Implement cross-file support (with async) for H5Ocopy and H5Lcopy. Other bug fixes.
Fix memory leak in object lookup.
Implem... 13 Jul 2020 Neil Fortner cfcac9b7b54 M Merge branch 'master' into async_link_obj
Also fix bug in automatic chunk sizing. 11 Jul 2020 Dana Robinson f46c07cb1d7 Updated VOL test submodule to latest commit. 01 Jul 2020 Neil Fortner d016caad9b6 M Merge pull request #120 in HDF5VOL/daos-vol from ~NFORTNE2/daos-vol:auto_chunk to master
* commit '34f3d46384456b4959c033ebc97fa1b0e7318f20':
Add env var H5_DAOS_CHUNK_TARGET_SIZE for configuring target chunk size for automatic chunking.
Change rounding cutoff for nchunks calculation for 1/2 to 1/3, to minimize the chance that rounding in chunk dims causes the chunk to be bigger than ideal. Still an approximation.
Switch to using integer modulus for rounding in nchunks calculation for... 24 Jun 2020 Neil Fortner 34f3d463844 Add env var H5_DAOS_CHUNK_TARGET_SIZE for configuring target chunk size
for automatic chunking. 21 Jun 2020 Neil Fortner 1955bcb9d82 Change rounding cutoff for nchunks calculation for 1/2 to 1/3, to
minimize the chance that rounding in chunk dims causes the chunk to be
bigger than ideal. Still an approximation. 19 Jun 2020 Neil Fortner 8f74c0d8ec7 Switch to using integer modulus for rounding in nchunks calculation for
automatic chunk sizing. 19 Jun 2020 Neil Fortner 08a9cc34cbb Switch auto chunk algorithm to use floating point math where
appropriate. Fix issue where chunk size was not saved to DCPL. 18 Jun 2020 Neil Fortner 8055c11e6e9 Add automatic chunk sizing. Target size currently hardcoded to 1 MB. 17 Jun 2020 Neil Fortner 1ebfb7e9edc M Merge pull request #134 in HDF5VOL/daos-vol from ~NFORTNE2/daos-vol:async_link_move to async_link_obj
* commit '3f236408543567c3f35099e1c891648bc95bc5d8':
Fix typos in link deletion ref count decrement.
Add support to H5Ldelete for decrementing the target object's ref count, deleting the object if it drops to 0.
Implement internal asynchrony for link move. Compiles but not tested. Will not work until link delete is fully asynchronous. 11 Jul 2020 Neil Fortner 3f236408543 Fix typos in link deletion ref count decrement. 11 Jul 2020 Neil Fortner fe53a68da77 Add support to H5Ldelete for decrementing the target object's ref count,
deleting the object if it drops to 0. 09 Jul 2020 Neil Fortner 299f15e3cf9 M Merge branch 'async_link_obj' into async_link_move 09 Jul 2020 Neil Fortner 3aada326ddb M Merge branch 'async_rc' into async_link_move 08 Jul 2020 Neil Fortner 225ca511f85 Implement internal asynchrony for link move. Compiles but not tested.
Will not work until link delete is fully asynchronous. 28 Jun 2020 Neil Fortner 04d87f8db78 M Merge pull request #131 in HDF5VOL/daos-vol from ~NFORTNE2/daos-vol:async_rc to async_link_obj
* commit 'ce9e8973d5aea74ef99735f7da2338676367b035':
Implement full async support for H5Ocopy. Implement cross-file support (with async) for H5Ocopy and H5Lcopy. Other bug fixes.
Fix memory leak in object lookup.
Add full internal asynchrony to all object specific operations.
Implement internal asynchrony for H5Oget_info. Implement internal internal asynchrony for H5Ovisit (there is stil... 10 Jul 2020 Neil Fortner ce9e8973d5a M Merge branch 'async_link_obj' into async_rc 08 Jul 2020 Jordan Henderson 83e192577ac M Merge pull request #132 in HDF5VOL/daos-vol from ~JHENDERSON/daos-vol:async_link_obj to async_link_obj
* commit 'b368f2115135b566b8aca9230c653b3f9b543329':
Implement internal asynchrony for link deletion 02 Jul 2020 Jordan Henderson b368f211513 Implement internal asynchrony for link deletion
Add support for collective link deletion 01 Jul 2020 Neil Fortner 972df5c2ea5 M Merge pull request #127 in HDF5VOL/daos-vol from ~NFORTNE2/daos-vol:async_rc to async_link_obj
* commit 'd3fbbc27805c156625a9124be1303709a5aa55ad':
Add ref count incrementing to link copy. Add task parallel execution to hard link creation. Other minor fixes.
Fix comments/formatting.
Implement object reference count tracking. H5Oincr/decr_refcount not yet implemented. H5Ldelete does not yet reduce the ref count. H5Oget_info does not yet return the ref count. 29 Jun 2020 Neil Fortner 60f8110555b Implement full async support for H5Ocopy. Implement cross-file support
(with async) for H5Ocopy and H5Lcopy. Other bug fixes. 08 Jul 2020 Neil Fortner 4028c8e4d0d Fix memory leak in object lookup. 02 Jul 2020 Neil Fortner 054bb96fac5 Add full internal asynchrony to all object specific operations. 30 Jun 2020 Neil Fortner 2de2d0b898d Implement internal asynchrony for H5Oget_info. Implement internal
internal asynchrony for H5Ovisit (there is still a wait at the top
level). Add reference count fetch to H5Oget_info. 29 Jun 2020 Neil Fortner d3fbbc27805 M Merge branch 'async_link_obj' into async_rc 29 Jun 2020 Jordan Henderson 5c84e33d79c M Merge pull request #124 in HDF5VOL/daos-vol from ~JHENDERSON/daos-vol:async_link_obj to async_link_obj
* commit 'a7616a218c713299bfbc736c0fdfbe6b707aea90':
Update object exists callback to be fully async
Add support for internal async H5Ocopy, H5Ovisit and H5Oget_info 29 Jun 2020 Jordan Henderson a7616a218c7 Update object exists callback to be fully async
Update H5_daos_object_get_oid_by_idx to be fully async
Updates to async H5O and H5A code from review 29 Jun 2020 Jordan Henderson 939f470a308 M Merge branch 'async_link_obj' of
https://bitbucket.hdfgroup.org/scm/hdf5vol/daos-vol into async_link_obj
# Conflicts:
# src/daos_vol.h
# src/daos_vol_link.c
# src/daos_vol_obj.c 27 Jun 2020 Jordan Henderson 9762012a094 Add support for internal async H5Ocopy, H5Ovisit and H5Oget_info 24 Jun 2020 Neil Fortner 71cc381d71a M Merge pull request #129 in HDF5VOL/daos-vol from ~NFORTNE2/daos-vol:async_link_obj to async_link_obj
* commit 'e7c43d49f4a6eed7d2915cbd1e34eaf229a01032':
Remove unused function H5_daos_group_update_max_crt_order_key(). Add missing function description.
Implement internally asynchronous group get info. Other minor fixes. 28 Jun 2020 Neil Fortner e7c43d49f4a Remove unused function H5_daos_group_update_max_crt_order_key(). Add
missing function description. 27 Jun 2020 Neil Fortner 177fd1a3dd2 Implement internally asynchronous group get info. Other minor fixes. 27 Jun 2020 Neil Fortner 26c2eadd3ed M Merge pull request #128 in HDF5VOL/daos-vol from ~NFORTNE2/daos-vol:async_link_obj to async_link_obj
* commit '15c06bb524c2d2ee8258adf938f44761284fedc7':
Implement internally asynchronous H5Lexists. Other minor fixes. 27 Jun 2020 Neil Fortner 15c06bb524c M Merge branch 'async_link_obj' of ssh://bitbucket.hdfgroup.org:7999/~nfortne2/daos-vol into async_link_obj 27 Jun 2020 Neil Fortner f6d0db44d22 M Merge pull request #126 in HDF5VOL/daos-vol from ~NFORTNE2/daos-vol:async_link_obj to async_link_obj
* commit '7019d4fcad47eed78f1bd2e5553182d52ff3f317':
Implement internally asynchronous H5Lget_val. Other minor fixes. 25 Jun 2020 Neil Fortner 6cc6cf81933 Implement internally asynchronous H5Lexists. Other minor fixes. 27 Jun 2020 Neil Fortner ee77a3c2273 Add ref count incrementing to link copy. Add task parallel execution to
hard link creation. Other minor fixes. 28 Jun 2020 Neil Fortner 111629911f1 Fix comments/formatting. 27 Jun 2020 Neil Fortner 0e1b82408e4 Implement object reference count tracking. H5Oincr/decr_refcount not
yet implemented. H5Ldelete does not yet reduce the ref count.
H5Oget_info does not yet return the ref count. 26 Jun 2020 Neil Fortner 7019d4fcad4 M Merge branch 'async_link_obj' of ssh://bitbucket.hdfgroup.org:7999/~nfortne2/daos-vol into async_link_obj 25 Jun 2020 Neil Fortner 823f6d90cff M Merge pull request #123 in HDF5VOL/daos-vol from ~NFORTNE2/daos-vol:async_link_obj to async_link_obj
* commit 'b613de5711281394167a72fc97f6906fcfdac86d':
Add/clarify comments for link iterate by creation order.
Implement internal asynchrony for link iteration by creation order. Also fix memory leak in link get info, other minor fixes. 24 Jun 2020 Neil Fortner c85e9d26aed Implement internally asynchronous H5Lget_val. Other minor fixes. 25 Jun 2020 Neil Fortner b613de57112 Add/clarify comments for link iterate by creation order. 24 Jun 2020 Neil Fortner 1059f92f0d4 M Merge branch 'async_link_obj' of ssh://bitbucket.hdfgroup.org:7999/~nfortne2/daos-vol into async_link_obj 24 Jun 2020 Neil Fortner 711667403eb M Merge pull request #122 in HDF5VOL/daos-vol from ~NFORTNE2/daos-vol:async_link_obj to async_link_obj
* commit '11575f0beba30c92d609925ccd7889395e08df1d':
Fix link get name by index functions to always return as much of the link name as possible, even if the buffer is too small. 21 Jun 2020 Neil Fortner 1c3b7059a8c Implement internal asynchrony for link iteration by creation order.
Also fix memory leak in link get info, other minor fixes. 24 Jun 2020 Neil Fortner 11575f0beba M Merge branch 'async_link_obj' of ssh://bitbucket.hdfgroup.org:7999/~nfortne2/daos-vol into async_link_obj 21 Jun 2020 Neil Fortner d28ed76df34 M Merge pull request #121 in HDF5VOL/daos-vol from ~NFORTNE2/daos-vol:async_link_obj to async_link_obj
* commit 'd65aa559ce831b4e7713918c2276d52b01914314':
Implement internal asynchrony for link copy operations. Create internal version of H5_daos_link_copy() (H5_daos_link_copy_int()). 21 Jun 2020 Neil Fortner f6add3ad794 Fix link get name by index functions to always return as much of the
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