hdf5

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Author Commit Message Commit Date Chris Hogan 20668879aba Add locks for multithreaded writes 26 Jun 2020 Chris Hogan 77a7e926587 Add some locking around shared data in main path for multiple threads acting on a single dataset 25 Jun 2020 Chris Hogan 39a03f542ce Add side locks to H5Dclose 22 Jun 2020 Chris Hogan ffeaf3ac71a Lock all side calls in H5Dopen 17 Jun 2020 Chris Hogan abbdae24af0 Temporary: Expose H5S__init_package so it can happen on main thread 15 Jun 2020 Chris Hogan 6878b70be15 No locks on H5Dread 28 May 2020 Chris Hogan 029d8515c86 Every side call takes the global lock 27 May 2020 Larry Knox 70011fbfcbeM Merge pull request #2646 in HDFFV/hdf5 from ~LRKNOX/hdf5_lrk:develop to develop * commit '998c6470d78e14228695419c3b514c35ecf3d69e': Remove unnecessary version conditions for Clang compilers. 12 Jun 2020 Larry Knox 998c6470d78 Remove unnecessary version conditions for Clang compilers. 12 Jun 2020 Vailin Choi f295ed11665M Merge pull request #2643 in HDFFV/hdf5 from ~VCHOI/my_third_fork:bugfix/HDFFV-10961-h5clear-usage-statement-give to develop * commit '01b632c69ca1c97c2b0e1aaeeab1dd2362b580a6': Fix for HDFFV-10961: Couple changes to the tests' usage output files for h5clear. Fix for HDFFV-10961: add description to usage for --increment option. 11 Jun 2020 vchoi 01b632c69ca Fix for HDFFV-10961: Couple changes to the tests' usage output files for h5clear. 11 Jun 2020 vchoi c597bd50d22 Fix for HDFFV-10961: add description to usage for --increment option. 11 Jun 2020 Larry Knox 3650841a0a3M Merge pull request #2636 in HDFFV/hdf5 from ~LRKNOX/hdf5_lrk:HDFFV-11000-update-testh5cc.sh.in-for-version to develop * commit '5c0bd670d6e9919c463fbc05de99e2ba55b0761e': Add tests for all version to H5_NO_DEPRECATED_SYMBOLS section and to section for current version, with and without default API version flags. HDFFV-11000: update-testh5cc.sh.in to test sample versioned functions in HDF5 1.10, 1.12 and develop. 10 Jun 2020 Larry Knox 5c0bd670d6e Add tests for all version to H5_NO_DEPRECATED_SYMBOLS section and to section for current version, with and without default API version flags. 10 Jun 2020 Larry Knox e66cec62220 HDFFV-11000: update-testh5cc.sh.in to test sample versioned functions in HDF5 1.10, 1.12 and develop. 09 Jun 2020 Larry Knox 1e6b6b4bc6eM Merge pull request #2639 in HDFFV/hdf5 from ~LRKNOX/hdf5_lrk:develop to develop * commit 'a33667faf226f5d8c9633bf537893e8fce1bf1f6': Add c++ to --enable-sanitize-checks option. 10 Jun 2020 buildbot a33667faf22M Merge branch 'develop' of https://bitbucket.hdfgroup.org/scm/~lrknox/hdf5_lrk into develop 10 Jun 2020 Larry Knox a56da14860eM Merge pull request #2633 in HDFFV/hdf5 from ~LRKNOX/hdf5_lrk:develop to develop * commit '20eab963899841c9a003baebead8e3bc07d9e127': Remove duplicate entries in MANIFEST. Make changes to CMake CompilerFlags.cmake files so extra flags are loaded for non-GNU compilers. Update new clang files to not pick up clang as vendor for pgCC. Add new files to MANIFEST Temporary demotion of 2 -Werror warning flags that fail on macos 10.12 Remove Production flag unknown to Apple clang. 10 Jun 2020 Larry Knox 20eab963899 Remove duplicate entries in MANIFEST. 10 Jun 2020 Larry Knox 63f1a713cc2M Merging in latest from upstream (HDFFV/hdf5:refs/heads/develop) * commit '7f0c0134166275c0745e0e65f9d81b4de72d5ce2': Fix MANIFEST Remember the info for the last ID looked up for a given ID type. Eliminate allocating file & memory offset & length arrays when performing I/O on a single element. Remove redundant metadata cache tagging from some low-level internal chunk functions. The metadata cache tagging has already been done by routines further up the call stack. 10 Jun 2020 Dana Robinson 7f0c0134166M Merge pull request #2637 in HDFFV/hdf5 from ~DEROBINS/hdf5_der:develop_minor to develop * commit '1e038bf49588d163762965c7a15fb76e3a689ef2': Fix MANIFEST 10 Jun 2020 Dana Robinson 1e038bf4958 Fix MANIFEST 10 Jun 2020 Quincey Koziol 02aea018a12M Merge pull request #2635 in HDFFV/hdf5 from cache_last_id_info to develop * commit '0ef32f07fb9e8fb6063f3318425506047454d6f4': Remember the info for the last ID looked up for a given ID type. 10 Jun 2020 Quincey Koziol 0ef32f07fb9 Remember the info for the last ID looked up for a given ID type. 09 Jun 2020 Quincey Koziol 030cd9fab50M Merge pull request #2634 in HDFFV/hdf5 from opt_single_selection_io to develop * commit 'a8a4e9f27b67ae2e22970e42859225adcc2e5cbb': Eliminate allocating file & memory offset & length arrays when performing I/O on a single element. 10 Jun 2020 Quincey Koziol a8a4e9f27b6 Eliminate allocating file & memory offset & length arrays when performing I/O on a single element. 09 Jun 2020 Quincey Koziol 04ed567bd7fM Merge pull request #2632 in HDFFV/hdf5 from remove_redundant_chunk_tags to develop * commit '9e8899c3b47a2041242dc4539ca8b1c5e151a371': Remove redundant metadata cache tagging from some low-level internal chunk functions. The metadata cache tagging has already been done by routines further up the call stack. 10 Jun 2020 Quincey Koziol 9e8899c3b47 Remove redundant metadata cache tagging from some low-level internal chunk functions. The metadata cache tagging has already been done by routines further up the call stack. 09 Jun 2020 buildbot 715055bfdd8 Add c++ to --enable-sanitize-checks option. 10 Jun 2020 Larry Knox 77efb340a1b Make changes to CMake CompilerFlags.cmake files so extra flags are loaded for non-GNU compilers. 10 Jun 2020 Larry Knox 32c353ed436 Update new clang files to not pick up clang as vendor for pgCC. Add new files to MANIFEST Temporary demotion of 2 -Werror warning flags that fail on macos 10.12 Remove Production flag unknown to Apple clang. 09 Jun 2020 Larry Knox bc51dea95acM Merge pull request #2631 in HDFFV/hdf5 from ~LRKNOX/hdf5_lrk:develop to develop * commit 'b942a4d8a3e27317cac50ce37ff5302d477664d8': Clean up code to get clang version in config/linux-gnulibc1 08 Jun 2020 Larry Knox b942a4d8a3e Clean up code to get clang version in config/linux-gnulibc1 08 Jun 2020 Larry Knox 23d887dc22bM Merge pull request #2623 in HDFFV/hdf5 from ~LRKNOX/hdf5_lrk:develop to develop * commit 'c7626f79fdee4eee13925e240ef41e61f3367eab': Add flags from config/clang-warnings/*general files to H5 C and CXX flags for all versions of Clang and Clang++ compilers. Switched from cut to awk in testcheck_version.sh.in to avoid dependence on tab vs. " " in version definitions in H5public.h. Add files for adding warning flags for clang compilers in autotools configure. 08 Jun 2020 Larry Knox c7626f79fdeM Merging in latest from upstream (HDFFV/hdf5:refs/heads/develop) * commit 'aa338c3a87a4544ccb164832422e3e2462a57b88': Detect when there's the same-shaped selection of a single block of elements on both selections, but with different selection types (i.e. one selection defined as an 'all' type and the other as a hyperslab or point type), without falling into the generic selection iteration case. Normalization of H5T.c with 1.10. Normalization of H5D.c with 1.10. 07 Jun 2020 Larry Knox de9491e3651 Add flags from config/clang-warnings/*general files to H5 C and CXX flags for all versions of Clang and Clang++ compilers. Switched from cut to awk in testcheck_version.sh.in to avoid dependence on tab vs. " " in version definitions in H5public.h. 06 Jun 2020 Larry Knox f7bc306c19a Add files for adding warning flags for clang compilers in autotools configure. 02 Jun 2020 Dana Robinson 56ab55be3feM Merge pull request #2630 in HDFFV/hdf5 from ~DEROBINS/hdf5_der:develop_minor to develop * commit '87695c999ad7ea348ee6dc03b46b0bd345f7d7df': Minor normalizations with HDF5 1.10. 08 Jun 2020 Dana Robinson 87695c999ad Minor normalizations with HDF5 1.10. 07 Jun 2020 Quincey Koziol aa338c3a87aM Merge pull request #2626 in HDFFV/hdf5 from tiny_shape_same_opt to develop * commit 'de54cff50c419751e0080b6a732facac43f87ba6': Detect when there's the same-shaped selection of a single block of elements on both selections, but with different selection types (i.e. one selection defined as an 'all' type and the other as a hyperslab or point type), without falling into the generic selection iteration case. 06 Jun 2020 Quincey Koziol de54cff50c4 Detect when there's the same-shaped selection of a single block of elements on both selections, but with different selection types (i.e. one selection defined as an 'all' type and the other as a hyperslab or point type), without falling into the generic selection iteration case. 05 Jun 2020 Dana Robinson 8a2c6d868b7M Merge pull request #2625 in HDFFV/hdf5 from ~DEROBINS/hdf5_der:develop_minor to develop * commit 'e22d126639e139518e4b5f1ac35a008ec429f698': Normalization of H5T.c with 1.10. Normalization of H5D.c with 1.10. 04 Jun 2020 Dana Robinson e22d126639e Normalization of H5T.c with 1.10. 04 Jun 2020 Dana Robinson a0d9959b431 Normalization of H5D.c with 1.10. 04 Jun 2020 Quincey Koziol 0b9979f0752M Merge pull request #2622 in HDFFV/hdf5 from fix_h5doappend to develop * commit 'c6b836527f31a731e022083ebe1b9b18f8cdd29a': Eliminate unneccesary creation of DXPL 02 Jun 2020 Quincey Koziol c6b836527f3 Eliminate unneccesary creation of DXPL 02 Jun 2020 Dana Robinson 1c8b4e9fabfM Merge pull request #2621 in HDFFV/hdf5 from ~DEROBINS/hdf5_der:develop_minor to develop * commit 'cc15d1039af86deb77c9dc9188412ce361599b17': Normalizations with 1.10 branch. 02 Jun 2020 Dana Robinson cc15d1039af Normalizations with 1.10 branch. 02 Jun 2020 Dana Robinson 1007702f875M Merge pull request #2619 in HDFFV/hdf5 from ~DEROBINS/hdf5_der:develop_minor to develop * commit '5f0eed3fdc4fff9b714b5aa3d0d43114a95c0f29': Normalization with hdf5_1_10 01 Jun 2020 Dana Robinson 5f0eed3fdc4 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