Commits
Quincey Koziol committed e1fc13b2152
Many changes to address NCF-177 (renaming dimensions and variables). Also many cleanups to fix compiler warnings, streamline iteration over objects in HDF5 file when opening the file, and generally straightening out the code to be cleaner and simpler. Tested on Mac OS/X with gcc 4.8 and OpenMPI (which uses clang).