vchoi_fork

[svn-r6709] Purpose:
    Bug fixes/API changes

Description:
    Previously, the Communicator and Info object arguments supplied
    to H5Pset_fapl_mpio() are stored in the property with its handle
    values.  This meant changes to the communicator or the Info object
    after calling H5Pset_fapl_mpio would affect the how the property
    list function.  This was also the case when H5Fopen/create operated.
    They just stored the handle value.  This is not according to the
    MPI-2 defined behavior of how Info objects should be handled. (MPI-2
    defines Info objects must be parsed when called.)
    The old design was trying to avoid numerous duplicates of the same
    information (e.g., every property object holds one version, every
    file opened holds another version, when all of them are referring to
    the same original version.)  Nevertheless it is safer to implement
    it according to MPI-2 definition.
    Futhermore, the library often needs to do message passing using the
    supplied communicator.  Using the same communicator as the application
    version may result in some messages mix up.
Solution:
    H5Pset_fapl_mpio now stores a duplicate of each of the communicator
    and Info object.
    H5Pget_fapl_mpio returns a duplicate of its stored communicator and
    Info object.  It is now the responsibility of the applications to free
    those objects when done.
    H5Fopen/create also stores a duplicate of the communicator and Info
    object supplied by the File Access Property list.
    H5Fclose frees those duplicates.
    There are a few more internal VFL call back functions that they
    follow this "make duplicates" requirement.

Platforms tested:
"h5committested".
What other platforms/configurations were tested?
    Eirene (mpicc), sol(mpicc), copper(parallel)

Misc. update:
Need to update MANIFEST for the added t_ph5basic.c which tests the
correctness of duplicated communicator and INFO object.