[svn-r24360] Jira issue 8528: H5Fget_obj_ids overfilled the list of object IDs by one. This is the second round of checkin after receiving review comments from people. I put the safeguard in both H5F_get_objects and H5F_get_objects_cb to prevent overfill the list.tested with h5committest.
[svn-r24358] Changed the big test so that it runs using the h5_fileaccess() fapl.The previous behavior was to execute a sec2, stdio, and family
test everytime it ran, which was very inefficient under check-vfd.
Tested on:
32- and 64-bit LE linux (jam and koala)
64-bit BE linux (ostrich)
64-bit OS-X 10.6 (fred)
[svn-r24333] Added a few volatile keywords to H5detect.c to quiet Visual Studio warnings. Also added a void to a Windows-specific function.These are both trivial changes that don't affect behavior.
Tested on: Visual Studio 2010 on 64-bit Windows 7
[svn-r24307] Issue 8147: CLANG compiler with the options -fcatch-undefined-behavior and -ftrapv catches some defined behavior in the alignment algorithm of the macro DETECT_I in H5detect.c. I documented it as a known problem.No test is needed.
[svn-r24291] Description: - Added a lot of documentation to classes for Reference Manual.
- Fixed some format inconsistencies
Platforms tested:
Linux/ppc64 (ostrich)
Linux/32 2.6 (jam)
Linux/64 2.6 (koala)/PGI compilers
[svn-r24285] Eliminate several "passing argument ... with different width due to prototype" warnings by casting constants to size_t where expected by string functions.Tested on jam, koala,ostrich and platypus with h5committest.
[svn-r24261] Description: Correct H5I use of skip list to acquire the 'next' pointer in the skip list after the ID's 'free' callback has been called, since it occasionally deletes the 'next' node. Also a little bit of code cleanup in other modules.
Tested on:
FreeBSD/32 8.2 (loyalty) w/gcc4.6, w/C++ & FORTRAN, in debug mode
FreeBSD/64 8.2 (freedom) w/gcc4.6, w/C++ & FORTRAN, in debug mode
Linux/32 2.6 (jam) w/PGI compilers, w/default API=1.8.x,
w/C++ & FORTRAN, w/threadsafe, in debug mode
Linux/64-amd64 2.6 (koala) w/Intel compilers, w/de...
[svn-r24255] Description: Switch H5I internal data structure from using hash table to skip lists.Tested on:
Mac OSX 10.8.4 (amazon) w/C++ & FORTRAN
FreeBSD, Linux, etc. forthcoming
[svn-r24235] Description: - Appended h5tutr_ to names of data files to avoid name clashing with existing examples. - Added example dependencies to Makefile.* (pointed out by Allen)Platforms tested:
SunOS 5.11 (emu) with gmake
Linux/ppc64 (ostrich)
Linux/32 2.6 (jam)
Linux/64 2.6 (koala)/PGI compilers
[svn-r24234] Bug: tfile.c was failing in the ADA AIX system. The reason was typo in the index variable in the newly added test_get_obj_ids().Solution: fixed the typo.
Tested: AIX machine. (Did not run h5committest because the fix is in a remote
machine and the fix is quite obvious.)
[svn-r24221] Bug ID: HDFFV-8512Mailing lists instructions are incorrect.
Fix by removing hdf5dev which has long retired (2009). Subscription requests
should be sent to new address due to server change.
Tested: tried to subscribe myself and it worked.
[svn-r24210] Jira issue 8528: H5Fget_obj_ids overfilled the list of object IDs by one. I moved the safeguard in H5F_get_objects_cb to the beginning of the function to prevent overfill the list. I added a new test case for this problem and fix in tfile.c.Tested with h5committest.
[svn-r24202] Bug fix: HDFFV-8271 Big.c error in address generated by random number.Description:
There is a bug in the current big.c tests. In a nut-shell,
the writing part randomly picks 50 locations and write 4KB
from that location. Random location range is from byte 0
to end of dataset. There is the problem--if the random location
is greater than (end of dataset - 4KB), then error.
Solution:
Adjust the random number to be at least 4KB less than the end of the
dataset. That...
[svn-r24194] Don't add hdf5 library dependencies to lib files when --disable-sharedlib-rpath configure option is invoked. Fix for HDFFV-8276.Tested with h5committest and on hdf-duck.
[svn-r24188] Purpose: Fixed bug introduced in r24163Description:
- The failure in daily test was caused by missing initialization of member
"id" in a few constructors. This is now fixed.
- Added two overloaded H5Location::setComment
- Improved some error reporting in H5Location
- Improved error reporting in tests
Platforms tested:
Linux/32 2.6 (jam)
SunOS 5.11 (emu)
Linux/64 2.6 (koala)/PGI compilers
[svn-r24174] Purpose: Add examplesDescription:
Added tutorial examples that Barbara made following the C tutorial examples.
They will be configured for daily test.
Platforms tested:
Linux/32 2.6 (jam) - tested by running a script that compiled them with
h5c++ and executing the examples; output are checked manually
[svn-r24171] Purpose: Fix problem with gcc 4.8Description:
With optimization enabled, gcc 4.8 inserts garbage into the padding bytes of
floating point types when assigning from a literal constant. This caused
problems when H5detect.c scanned the bits in floating point types to determine
their properties.
Modified H5detect.c to scan for padding before further analyzing the type, and
to ignore all information in the padding areas. Also re...
[svn-r24167] HDFFV-8513, HDFFV-8522 Plugin testing in h5repack, h5dump. Add more usage info for UserMacros. Add new option information about the Plugin default path.Tested: local linux, jam
[svn-r24163] Purpose: More on HDFFV-7520 and HDFFV-533 Description: - Improved the changes in revisions r22836 and r23438, mainly on the wrappers of reference, dereference, get region, and set/getcomment. - Added more tests.Platforms tested:
Linux/32 2.6 (jam)
SunOS 5.11 (emu)
Linux/ppc64 (ostrich)
[svn-r24161] Purpose: More on HDFFV-7520 and HDFFV-533Description:
- Completed the changes in revisions r22836 and r23438 with improvement
on wrappers such as reference, dereference, get region, and set/getcomment.
- Added more tests.
Platforms tested:
Linux/32 2.6 (jam)
SunOS 5.11 (emu)
Linux/ppc64 (ostrich)
Raymond Lu
Dana Robinson
Private HDF
Binh-Minh Ribler
Allen Byrne
Larry Knox
Mohamad Chaarawi
Quincey Koziol
Albert Cheng
Neil Fortner