[svn-r26786] In libhdf5.settings.in, changed the C++ shared library setting variable from H5_CXX_SHARED (which no longer exists) to enable_static.Tested on: jam (configure only - minor change)
[svn-r26782] Remove md5 from METHODS arguments for calling bin/release script from snapshot script. md5 method was removed and md5 checksums are always produced for all compression methods.
[svn-r26750] HDFFV-8667: h5repack crashes on enumerated 8-bit type nested in compound type.Added the testing to h5repack where it belongs.
Undo the tests added to h5dump.
Tested: h5committested plus tested in jam by hand.
[svn-r26737] Purpose: Fix daily test failureDescription:
- In DataType::DataType(const PredType& pred_type), using DataType::copy
will invoke DataType::close() unnecessarily, which will produce undefined
behavior. Changed to call H5Tcopy directly, code reuse is not useful in
this case.
- Also, fixed CommonFG::childObjVersion to return expected value outside of
an if/else block.
Platforms tested:
Linux/ppc64 (...
[svn-r26712] Bug fix: cmakehdf5 broken because zlib is no longer configure in by default. That broke the testings as some testfiles have zlib compressed datasets.Added options control to enable the linking of zlib external libarary by
default and turn off the szip library linking as szip library may not be
avaiable. This matches the established settings.
Tested: run cmakehdf5 by hand in jam and platypus.
Also tested in wren but it failed in the testing stage.
Also tried "cmakehdf5 --script" in jam. It failed.
[svn-r26711] Recommitting revisions 26669 and 26670, removing VPATH and redundant /usr/include and lib in fcompile and link flags checks, now that I have run reconfigure. Also changed paths to h5cc, etc. in scripts to run installed examples from relative paths to absolute paths.Tested with h5committest.
[svn-r26702] HDFFV-8667: h5repack crashes on enumerated 8-bit type nested in compound type.Description:
The test added failed in some machines because the data file contains infinity values that different machines print them differently as "inf", "INF", "Inf", ...
Solution:
Added a "ignorecase" option to TOOLTEST() to do caseless matching between generated output vs expected output. This solved most machines problem for now.
Tested: h5committest, emu by hand for both development an...
[svn-r26695] Purpose: Fixed HDFFV-7947 (cont.)Description:
- Put back the UNUSED parameters in dsets test because the change to remove
the warning last time caused failure in setting filter, in turn, caused
failure in the test with such obscure/unrelated errors!
- Added incRefCount() to other constructors that missed from last time.
Platforms tested:
Linux/64 (platypus)
Linux/32 2.6 (jam)
SunOS 5.11 (emu)
[svn-r26690] Fix error in H5Sextent_copyWhen the selection is set to all, H5Sextent_copy did not update the number of
elements in the selection in the destination space. Fixed H5Sextent_copy to do
this. Added tests for this functionality.
Tested: jam, koala, ostrich (h5committest)
[svn-r26677] HDFFV-8957: h52gif crashes when run against one of our own examples The tool claimed it could handle 24bit images but there was no code to handle it. (or might be there were but was removed by previous revisions.) Also discovered that it does not accept multiple images nor -p for palette as its user document and online help message indicated.Solution:
Added code to verify dimension sizes are within 8 bit raster images limit and
added tests to verify the tools correctness.
Need to update user document tool.
Tested: h5committested.
[svn-r26675] HDFFV-9201: Create md5s for bzip, gzip and zip files An md5 checksum is produced for each archive created and stored in the md5 fileTested: jam by hand.
[svn-r26667] Purpose: Fixed HDFFV-8766Description:
Per user Jason Newton request, the following constructor is added:
H5File(hid_t existing_id);
Also, fixed H5File::openFile to close current file first before re-using
the object.
Platforms tested:
Linux/64 (platypus)
Linux/32 2.6 (jam gnu and Intel 15.0)
SunOS 5.11 (emu)
[svn-r26662] added option to configure support for fortran2003 API.--enable-fortran2003 | --disable-fortran2003:
enable or disable fortran2003 API. Default is off.
Tested: by hand in platypus.
[svn-r26655] Purpose: Fixed HDFFV-7947 Description: When copy constructor or constructor that takes an existing id is invoked, the C ref counter stays the same but there is an extra C++ object which later is destroyed and may cause the HDF5 id to be closed prematurely. The C++ library needs to increment the ref counter in these situations, so that the C library will not clos... However, the incrementing of ref count left some objects opened at the end
of the program, perhaps, due to compiler's optimization on cons/destructors. The constructor, that takes an existing id, needs to increment the counter
but it seems that the matching destructor wasn't invoked. The workaround
is to have a function for each class that has "id" that only sets the id
...
[svn-r26647] Description: Bring r26639 from autotools_rework branch to trunk: Switch AC_TRY_RUN macros to AC_RUN_IFELSE macros.
Tested on:
Linux/32 2.6.18 (jam) w/serial & parallel
(Daily tested on branch for 2+ days)
[svn-r26646] Bug fix: HDFFV-8957 h52gif crashes when run against one of our own examples.Description: h52gif crashed when it was asked to convert a 24bitimage.
Upon viewing the code, it did not prepare to handle images other than 2 dimensions.
It has no concept of multiple planes images. Further examinations showed past attempts
to fix it ended up removed some abilities (-p or multiple planes, animation, ...) have
been removed but documentation was not updated. Even its online hel...
[svn-r26645] Revert the part of revision 26642 that is in fortran/test and causes the error "undefined reference to `verify_fortran_integer_4_". files: tH5P_F03.f90 tf.f90Tested: h5committest and several failed daily tests.
[svn-r26643] Purpose: Adding new wrappers (HDFFR-9167 partially) Description: Added wrappers for C functions H5P[s/g]et_libver_bounds and wrappers for getting object header version // Sets bounds on versions of library format to be used when creating
// or writing objects.
void setLibverBounds(H5F_libver_t libver_low, H5F_libver_t libver_high) const;
// Gets the current settings for the library version format bounds.
void getLibverBounds(H5F_libver_t& libver_low, H5F_libver_t& libver_high) const;
// Returns the object header version o...
[svn-r26640] Purpose: Fix bugsDescription:
- Changed DataType::operator= to simply copy the id of rhs instead of
calling H5Tcopy because, when the operator= is invoked, a different
datatype id is created and it won't have the same characteristics as
rhs', specifically, if the rhs represents a named datatype, "this"
would still be a transient datatype.
- Added a DataType constructor that takes...
Dana Robinson
Private HDF
Larry Knox
Allen Byrne
Mohamad Chaarawi
Scot Breitenfeld
Quincey Koziol
Albert Cheng
Binh-Minh Ribler
Neil Fortner
Frank Baker