[svn-r21152] Description: Further patches for Jira 7638, to ensure that H5D/Aget_type will be attached to the correct top file. (This change to the library should reverted when Jira 7638 is finally finished)Tested on:
FreeBSD/32 8.2 (loyalty) w/gcc4.6, w/C++ & FORTRAN, in debug mode
FreeBSD/64 8.2 (freedom) w/gcc4.6, w/C++ & FORTRAN, in debug mode
Linux/32 2.6 (jam) w/PGI compilers, w/default API=1.8.x,
w/C++ & FORTRAN, w/threadsafe, in debug mode
Linux/64-amd64 2.6 (koala) w/Intel compilers, w/default API=1.6.x,
w/C++ & FORTRAN, in p...
[svn-r21146] Updated RELEASE.txt Replaced several old Linux platforms no longer in use with the current Linux test machine information.No test - doc file only.
M release_docs/RELEASE.txt
[svn-r21137] Description: Tiny change to reduce code coupling w/H5F package.Tested on:
FreeBSD/64 8.2 (freedom) w/debug
(too minor to require h5committest)
[svn-r21133] Description: More code cleanups to reduce coupling between packages that use the H5F internal routines, but really aren't part of the H5F "package".Tested on:
FreeBSD/32 8.2 (loyalty) w/gcc4.6, w/C++ & FORTRAN, in debug mode
FreeBSD/64 8.2 (freedom) w/gcc4.6, w/C++ & FORTRAN, in debug mode
Linux/32 2.6 (jam) w/PGI compilers, w/default API=1.8.x,
w/C++ & FORTRAN, w/threadsafe, in debug mode
Linux/64-amd64 2.6 (koala) w/Intel compilers, w/default API=1.6.x,
w/C++ & FORTRAN, in production mode
Solaris/32 2....
[svn-r21126] Description: Clean up some compiler warnings, but mainly an interim checkin on the path of reducing code coupling in the library by removing most of the places which were accessing H5F package definitions.Tested on:
Mac OS X/32 10.6.8 (amazon) w/debug
FreeBSD/32 8.2 (loyalty) w/debug
FreeBSD/64 8.2 (freedom) w/debug
Linux/64 2.6 (heiwa) w/debug
Linux/64 2.6 (ember) w/parallel
[svn-r21125] Description: Correct char arrays that were too small for strings defined. Also, change cleanup to work correctly.Tested on:
Mac OS X/32 10.6.8 (amazon) w/debug
FreeBSD/32 8.2 (loyalty) w/debug
FreeBSD/64 8.2 (freedom) w/debug
Linux/64 2.6 (heiwa) w/debug
Linux/64 2.6 (ember) w/parallel
[svn-r21124] Issue 2763 - adding OAPL_ID as a new parameter to H5Rdereference. A followup commit for r21117. I made 2 changes: 1. Quincey changed H5P_DATASET_ACCESS_DEFAULT to H5P_DEFAULT for the tests that call H5Rdereference. Inside H5R_dereference, I assigned H5P_DATASET_ACCESS_DEFAULT to OAPL_ID if it is H5P_DEFAULT. 2. I added the test for invalid OAPL_ID in trefer.c.Tested on jam, koala, heiwa.
[svn-r21121] Description: Switch from H5P_DATASET_ACCESS_DEFAULT to H5P_DEFAULT for calls to H5Rdereference2().Tested on:
Mac OS X/32 10.6.8 (amazon) w/debug
(too minor to require h5committest)
[svn-r21120] Description: Check in ugly version of fix for Jira #7638. I'm going to leave the issue open in Jira and when the library has been refactored to use shared file pointers (instead of top file pointers) for file operations, I'll uncomment the check in src/H5Oshared.cTested on:
Mac OS X/32 10.6.8 (amazon) w/debug
(too small for h5committest)
[svn-r21119] Description: Simplify use of property lists to H5Rdereference, and switch to use H5Rdereference2.Tested on:
Mac OS X/32 10.6.8 (amazon)
(too small to require h5committest)
[svn-r21117] Issue 2763 - I added a new parameter of object access property list to the function H5Rdereference. It's called H5Rdereference2 now. H5Rdereference function has been deprecated to H5Rdereference1. I also added some test cases in trefer.c.Tested on jam, heiwa, and koala.
[svn-r21113] Description: Revert the previous makefile change as release snapshot test failed with
MANIFEST check. Don't clean 'testfiles' dir via 'make distclean' for
the case of build&test in source dir.
In regular daily testings, we build&test in seperate dir from source dir,
so no issues occurred.
However for the release snapshot test, it seems that we build&test in
source dir.
T...
[svn-r21105] Fixed two bugs: - h5repack: h5repack failed to copy dataset if the layout is changed from chunked with
unlimited dims to contiguous. (PC -- 2011/07/15)
- h5diff: "--delta" option considers two NaN of the same type are different, which is wrong
based on http://www.hdfgroup.org/HDF5/doc/RM/Tools.html#Tools-Diff. (PC -- 2011/07/15)
[svn-r21101] HDFFV-7639Purpose:
Remove H5_MPI_SPECIAL_COLLECTIVE_IO_WORKS and
H5_MPI_COMPLEX_DERIVED_DATATYPE_WORKS #defines from source.
Description:
Two advanced parallel functionalities, special collective IO and
complex derived datatypes, are not supported by older
implementations of mpi, and thus our code limits the use of these
features with #ifdefs and has checks in configure to set ...
[svn-r21072] Purpose: Work for HDFFV-7600 - GMQS: h5diff - argument options -d, -p and --use-system-epsilon should be mutually exclusive.Description:
Fixed h5diff to display instructive error message and exit with 1
when mutually exclusive options (-d, -p and --use-system-epsilon)
are used together.
Tested:
jam (linux32-LE), koala (linux64-LE), heiwa (linuxppc64-BE), tejeda (mac32-LE), linew (solaris-BE), Cmake (jam)
[svn-r21066] Purpose: Fix HDFFV-7522 "--enable-production=xxx will produce incorrect configure summary"Description:
Fixed a typo in configure.in that resulted in "-enableval" being
displayed by the configure summary (and set in the CONFIG_MODE
makefile variable) if the production mode was set to anything other
than yes, no, or profile. The summary and CONFIG_MODE variable will
now be set to the value specified by the user.
Tested:
jam, h5committest
[svn-r21063] Description: Tweak make_vers script so that it indents preprocessor commands inside #ifdefs, is more forgiving and informative about the input file's prefix, and is better parameterized with the global variables at the beginning of the script. When major versions are branched from the trunk, the $max_idx value should be the only value that needs to be changed in the version of... Changes to H5version.h file are just indention.
Tested on:
Mac OS X/32 10.6.8 (amazon)
(too minor to require h5committest)
[svn-r21057] [hdf5 Trunk ] TODO Purpose: Work for HDFFV-7602 - HDF5 command tools: Provide framework for reusable test files among tools Description: Provide framework to share test files among tools for tools test.Tested:
jam (linux32-LE), koala (linux64-LE), heiwa (linuxppc64-BE)
[svn-r21031] This is a follow-up checkin for r21015 (bug fix for Issue 2594). According to Quincey's suggestion, I moved the EOAs for individual files from H5FD_multi_fapl_t to H5FD_multi_t struct. It's a more proper place.Tested on jam, koala, and heiwa.
[svn-r21028] Description: Changed the length of the fortran string passed to HD5packFstring in the function nh5pget_external_c. The 3rd
argument should be the fortran length of the string, not the C length of the string (which includes the null).
Tested: jam (intel and gnu), also checked the example h5ex_d_extern.f90 which detected the problem on Amazon c2
machine (reported by Larry).
[svn-r21017] This is a follow-up checkin for r21015 (bug fix for Issue 2598). I added two minor changes: 1. put the output file for vfd.c test in the list for cleanup in Makefile.am; 2. put the data file in the list in CMakeLists.txt.Tested on jam - simple change.
[svn-r21015] Bug fix for Issue 2598 - In v1.6 library, there was EOA for the whole MULTI file saved in the super block. We took it out in v1.8 library because it's meaningless for the MULTI file. v1.8 library saves the EOA for the metadata file, instead. But this caused some backward compatibility problem. v1.8 library couldn't open the file ...Tested on jam, koala, and heiwa.
[svn-r21014] Purpose: HDFFV-5878 - GMQS: h5dump - incorrect output format for array type with multiple elements in an indexDescription:
Fixed h5dump to display the first line of each element into correct
position for multiple dimention array type.
Before this fix, the first line of each element in array were displayed
after the last line of previous element without moving to the next
line (+indentation)
Tested:
jam (linux32-LE), koala (linux64-LE), heiwa (linuxppc64-BE), tejeda (mac32-LE...
[svn-r21011] Change how test created files are cleared by clearing the files inside the test macro. Allows individual tests to be independently executed.Tested: local linux
[svn-r20991] I skipped the efc.c test for now because it opens the same file many times. VMS can't handle it. We need a solution in the future. Please see Issue 7620 in Jira about it.Not tested yet.
Quincey Koziol
Private HDF
Larry Knox
Albert Cheng
Raymond Lu
Jonathan Kim
Allen Byrne
Peter Cao
Mike McGreevy
Scot Breitenfeld