[svn-r20588] Description: Clean up code a bit, move new "terminate" VFD callback to new position in H5FD_class_t struct.Tested on:
Mac OS X/32 10.6.7 (amazon) w/debug & production
(h5committest not required on this branch)
[svn-r20577] Bug 1386 - allowing dimension size to be zero. I added test cases in the tests for h5dump and h5diff. I also added the test cases in the CMAKE script.Tested on jam, linew, and amani. Tested CMAKE on jam.
[svn-r20553] Description: Revert part of r20536 that was part of a Coverity merge.Tested on:
FreeBSD/32 6.3 (duty) in debug mode
FreeBSD/64 6.3 (liberty) w/C++ & FORTRAN, in debug mode
Linux/32 2.6 (jam) w/PGI compilers, w/default API=1.8.x,
w/C++ & FORTRAN, w/threadsafe, in debug mode
Linux/64-amd64 2.6 (amani) w/Intel compilers, w/default API=1.6.x,
w/C++ & FORTRAN, in production mode
Solaris/32 2.10 (...
[svn-r20548] Fixed bug in test/vfd.c (HDFFV-5936) that caused STDIO VFD test to fail on some platforms.The problem was that the test was a clone of the SEC2 test. The SEC2 test accepts a file descriptor (int) via a void pointer from H5Fget_vfd_handle() whereas the STDIO test needs to accept a FILE pointer. Storing the FILE pointer in an integer failed on some systems. The STDIO test now stores the file handle in FILE pointer and checks it for NULL instead of < 0.
[svn-r20543] revert install command for External library builds - copy of lib fails if permission to install location is denied.Does not affect build otherwise.
[svn-r20539] Description: Bring Coverity changes back to trunk:r20276:
Add recursive is vlen string function.
Cleanup resource leaks for issues: 200,202,329,688,811,812
r20277:
Check types and close by adding error section: issue 687
r20278:
Replaced implicit pointer conversion with (ocrt_info.new_obj != NULL).
r20280:
Addressed coverity issues 927-929 & 583. The real issue is failure to check
file name length -- at least at the H5FD interface leve...
[svn-r20536] Description: Clean up various warnings & code formatting issues. Bring changes from Coverity branch to trunk:
r20085:
Purpose: Fix coverity issue 793
Description: Modified H5S_hyper_project_simple_higher() to free the entire span
list in new_space on failure.
r20091:
This is a fix for coverity bug #1683.
Changed the two printfs to use %lu (unsigned long) for printing "dset_size".
r20162:
Purpose: Fix coverity issue 785
Description: Modified H5T_enum_...
[svn-r20535] Description: Add explicit test that checks that the 'fileno' field in H5O_info_t is the same for objects in the same file, whether the file was opened twice or not.Tested on:
FreeBSD/32 6.3 (duty) in debug mode
FreeBSD/64 6.3 (liberty) w/C++ & FORTRAN, in debug mode
Linux/32 2.6 (jam) w/PGI compilers, w/default API=1.8.x,
w/C++ & FORTRAN, w/threadsafe, in debug mode
Linux/64-amd64 2.6 (amani) w/Intel compilers, w/default API=1.6.x,
w/C++ & FORTRAN, in production mode
Solaris/32 2.10 (...
[svn-r20529] Purpose: Add testing for bug 1864Description:
Added internal tesitng routines to traverse a file and verify that symbol table
information is *always* cached, whenever possible. Added this check to the end
of many tests to check all the test files, right before the call to h5_cleanup.
Tested: jam, amani, heiwa (h5committest)
[svn-r20520] Removed ibm-aix6.x file which just sourced ibm-aix file. Removed code in configure.in that tried to distinguish different versions of AIX. This is no longer needed.Tested:
NCSA Blue-print. No h5committest since this affected AIX system only.
[svn-r20515] Description: Remove old, uneeded configuration customizations for FreeBSD systems. (config/freebsd) Also, convert a large stack variable into a dynamic memory allocation
and clean up a few compiler warnings (tools/h5dump/h5dumpgentest.c)
Tested on:
FreeBSD/32 8.2 (loyalty) w/debug & production
FreeBSD/64 8.2 (freedom) w/debug & production
[svn-r20513] Description: Correct several problems with compound datatypes that don't have any fields added:- Change assertion to error report when a file is encountered which has this
situation.
- Added check to attribute creation to avoid creating attributes with a
datatype like this (datasets and named datatypes already have the check)
Tested on:
FreeBSD/32 6.3 (duty) in debug mode
FreeBSD/64 6.3 (liberty) w/C++ & FORTRAN, in debug mode
Linux/32 2.6 (jam) w/PGI compiler...
[svn-r20504] Purpose: General shared library improvements for CYGWIN / AIX
Description:
Shared libraries are disabled on both CYGWIN and AIX due
to inability to build them correctly. Part of the problem
in both of these situations is the lack of the libtool
flag -no-undefined, which tells libtool that all needed
symbols are defined at link time (a requirement on these
systems) and that ...
[svn-r20502] Purpose: Add "silent make" mode configure option.
Description:
Automake 1.11 has a new option available that allows for a
silent make mode. This functionality needs to be explicitly
enabled in configure.in via the use of the automake macro
AM_SILENT_RULES, which is what this commit is adding.
This introduces a new configure option:
--{en|dis}able-silent-rules
Th...
[svn-r20499] Fixes erroneous H5_HAVE_GETTIMEOFDAY behavior on Windows (JIRA HDFFV-5931). Previously, H5_HAVE_GETTIMEOFDAY was never properly defined. The timezone struct and Wgettimeofday() timezone output was also added.This is a merge of several changesets from the log_vfd branch where this work took place: 20355, 20359, 20411, 20413, 20431, 20460
Tested on: Windows
[svn-r20496] Bug 1386 - allow dimension size to be zero even though it isn't unlimited. I made a change in H5Sset_extent_simple to forbid setting the dimension size bigger than existing maximal size. In this checkin, I restored it to the previous behavior that any change will wipe out previous record of dimensionality.Tested on jam - a simple change.
[svn-r20490] Purpose: Fixed HDFFV-4342 : GMQS: h5dump test fails when source directory is read-onlyDescription:
Updated CMake script to prevent stripping top 3 lines from expected output
file for cmake testing.
Also added missing test cases for "# Exceed the dimensions for subsetting"
from different Bug fix in the past.
Tested:
jam (linux32-LE), amani (linux64-LE), heiwa (linuxppc64-BE), tejeda (mac32-LE), linew (solaris-BE)
[svn-r20488] Purpose: Fix HDFFV-4342 : GMQS: h5dump test fails when source directory is read-onlyDescription:
Updated h5dump test case script to prevent entire test failure upon
source code directory is read-only.
Tested:
jam (linux32-LE), amani (linux64-LE), heiwa (linuxppc64-BE), tejeda (mac32-LE), linew (solaris-BE)
[svn-r20487] Bug 1386 - allow dimension size to be zero even though it isn't unlimited. This is a follow-up checkin for r20440 and r20469: 1. The dataspace code has another bug - when the maximal dimension isn't passed in for H5Sset_extent_simple, it is supposed to be same as the dimension. The current library sets NULL to it. I corrected it and added a test case to it. 2. I c...Tested on heiwa, jam, and amani.
[svn-r20482] Fixed issue HDFFV-5866 (BZ 2156). Changed scripts to run examples to use specific names for compiled executable files instead of a.out, which did not work on Cywin as it produces a.exe by default. Removed issue from known problems section of RELEASE.txt.Tested with Cygwin 1.7.8 on Windows 7.
This line, and those below, will be ignored--
M release_docs/RELEASE.txt
M hl/c++/examples/run-hlc++-ex.sh.in
M hl/fortran/examples/run-hlfortran-ex.sh.in
M hl/examples/run-hlc-ex.sh.in
M c++/examples/run-c++-ex.sh.in
M fortran/examples/run-fortran-ex.sh.in
M examples/run-c-ex.sh.in
[svn-r20480] Description: Remove global variable for the path name in the group traversal code. Also clean up a bunch of compiler warnings.Tested on:
Mac OS X/32 10.6.7 (amazon) w/debug & production
FreeBSD/32 6.3 (duty) w/debug
FreeBSD/64 6.3 (liberty) w/debug
Solaris/32 2.7 (linew) w/debug
[svn-r20477] remove duplicated -f option from a test case script. jam (linux32-LE), amani (linux64-LE), heiwa (linuxppc64-BE), tejeda (mac32-LE), linew (solaris-BE)
[svn-r20475] Purpose: - Revise shared Fortran library disabling scenarios in configure
- Improve configure output summary
Description:
Shared Fortran libraries are not supported on Mac, but were being
disabled by configure in a way that also forced the C libraries
to be static-only. This has been fixed, so now only shared Fortran
is disabled while shared C can remain.
This prompted two...
[svn-r20469] Bug 1386 - allow dimension size to be zero even though it isn't unlimited. This is a follow-up checkin for r20440: 1. I added a test case of extending dataset of zero dimension size and shrinking back to zero dimension size. 2. I updated the Makefile to include the new data file to be cleaned up.Tested on jam - relatively simple.
[svn-r20462] The basic STDIO VFD test in test/vfd.c fails on 64-bit Solaris 5.10 (SPARC) and 32-bit Darwin 10.7.0 (Intel). This check-in skips the STDIO test on all platforms while we investigate.Bug report HDFFV-5936 filed in JIRA.
[svn-r20459] Purpose:Progress on bug 2138 (bugzilla) / HDFFV-4298 (JIRA)
Description:
- Added basic VFD tests (i.e. cloned the SEC2 test) for the Windows, STDIO and log VFDs.
- Added H5Pget_driver() sanity check to all VFD's tests.
- Added log output file to list of files to clean up in Makefile.am.
Tested on:
- h5committest script platforms (jam, amani, heiwa)
- Windows 7 (32- and 64-bit)
[svn-r20440] Bug 1386 - allow dimension size to be zero even though it isn't unlimited. I added test cases for contiguous, compact, and chunked, and external storage datasets, and also attribute. The test includes dataspace selections. I'll handle the tools in the next step.Tested on jam, amani, and heiwa.
Quincey Koziol
Raymond Lu
Allen Byrne
Dana Robinson
Neil Fortner
Albert Cheng
Mike McGreevy
Jonathan Kim
Larry Knox