[svn-r15628] Description: Remove trailing whitespace from C/C++ source files, with the following script: foreach f (*.[ch] *.cpp)
sed 's/[[:blank:]]*$//' $f > sed.out && mv sed.out $f
end
Tested on:
Mac OS X/32 10.5.5 (amazon)
No need for h5committest, just whitespace changes...
[svn-r15627] This check-in fixes a bug inside parallel HDF5 testsuite. When enable-debug is turned on, a special macro block H5_HAVE_INSTRUMENTED_LIBRARY inside HDF5 will be executed to check if some collective chunk IO test cases are being run with the correct settings(one link, multiple chunk etc.). However,when complicated derived datatype in some mpi-io packages are not supported, the libra...This check-in fix this problem by providing a second property to avoid the false faiure message.
Tested at abe(NCSA linux cluster) and kagiso.
[svn-r15626] This check-in fixes a bug inside parallel HDF5 testsuite. When enable-debug is turned on, a special macro block H5_HAVE_INSTRUMENTED_LIBRARY inside HDF5 will be executed to check if some collective chunk IO test cases are being run with the correct settings(one link, multiple chunk etc.). However,when complicated derived datatype in some mpi-io packages are not supported, the libra...This check-in fix this problem by providing a second property to avoid the false faiure message.
Tested at abe(NCSA linux cluster) and kagiso.
[svn-r15622] Purpose: Add new source files to Windows projectsDescription:
This checkin adds the following source files to our Windows projects:
-- H5EAiblock.c
-- H5EAstat.c
-- H5EAdbg.c
[svn-r15618] Description: Add additional test and make a few cleanups in extensible array unit test.Tested on:
Mac OS X/32 10.5.4 (amazon) in debug mode
Mac OS X/32 10.5.4 (amazon) w/C++ & FORTRAN, w/threadsafe,
in production mode
FreeBSD/32 6.3 (duty) in debug mode
FreeBSD/64 6.3 (liberty) w/C++ & FORTRAN, in debug mode
Linux/32 2.6 (kagiso) w/PGI compilers, w/C++ & FORTRAN, w/threadsafe,
...
[svn-r15617] Description: Clean up how v2 B-tree (and extensible array) classes are determined in h5debug. Add support for extensible array headers and index blocks to h5debug
Tested on:
Mac OS X/32 10.5.4 (amazon) in debug mode
Mac OS X/32 10.5.4 (amazon) w/C++ & FORTRAN, w/threadsafe,
in production mode
FreeBSD/32 6.3 (duty) in debug mode
FreeBSD/64 6.3 (liberty) w/C++ & FORTRAN, in debug mode
Linux/32 2.6 (kagiso) w/PGI com...
[svn-r15614] Description: More extensible array features: add support for setting/getting elements in the array's index block.Tested on:
Mac OS X/32 10.5.4 (amazon) in debug mode
Mac OS X/32 10.5.4 (amazon) w/C++ & FORTRAN, w/threadsafe,
in production mode
FreeBSD/32 6.3 (duty) in debug mode
FreeBSD/64 6.3 (liberty) w/C++ & FORTRAN, in debug mode
Linux/32 2.6 (kagiso) w/PGI compilers, w/C++ & FORTRAN, w/threadsafe,
...
[svn-r15612] Description: Minor formatting cleanupsTested on:
Mac OS X/32 10.5.4 (amazon) in debug mode
Mac OS X/32 10.5.4 (amazon) w/C++ & FORTRAN, w/threadsafe,
in production mode
FreeBSD/32 6.3 (duty) in debug mode
FreeBSD/64 6.3 (liberty) w/C++ & FORTRAN, in debug mode
Linux/32 2.6 (kagiso) w/PGI compilers, w/C++ & FORTRAN, w/threadsafe,
...
[svn-r15609] Description: Omnibus compiler warning cleanup & some reformatting also.Tested on:
Mac OS X/32 10.5.4 (amazon)
Too minor to require h5committest
[svn-r15604] The MPI compiler(mvapich2-0.9.8p2patched-intel-ofed-1.2) at NCSA's linux cluster(Abe) fails to handle collective IO calls with very complicate MPI derived datatype. All the values of input parameters from HDF5 are correct before passing to MPI-IO collective calls. Sometimes the following errors happen:rank 0 in job 77 honest1.ncsa.uiuc.edu_60945 caused collective abort of all ranks
exit status of rank 0: killed by signal 9
Up to this point, we decide to turn off the use of advanced MPI derived datatype features inside HDF5 so that complicated selection tests are ensured to be handled by HDF5. This check-in reflects this.
[svn-r15588] Purpose: Add new h5repack tests to WindowsDescription:
New h5repack tests were added in revision 15551 and 15557, and also the syntax of one test was changed. This was causing errors on Windows. This checkin should fix those errors.
Tested:
VS2005 on WinXP
[svn-r15585] Purpose: Use H5test_kind_SIZEOF.f90 rather than H5test_kind.f90 in WindowsDescription:
A new version of H5test_kind is safer for platforms that support sizeof. We have replaced H5test_kind.f90 with it on Windows
[svn-r15584] Purpose: Add new extensible array source code and test project for WindowsDescription:
In revision 15549, new source code was added for the extensible array interface. This checkin adds the source code to Windows, along with the new test project, earray.
Note: The new H5EA interface causes compilation errors on Windows, and will need to be fixed in the source.
[svn-r15577] Description:Moved AM_CONDITIONAL([FORTRAN_HAVE_SIZEOF]....) outside of Fortran conditional loop so that the value gets registered regardless of whether Fortran is enabled.
[svn-r15573] Description:Compiles either H5test_kind.f90 or H5test_kind_SIZEOF.f90 depending on the availability of intrinsic Fortran function SIZEOF (indicated by the status of FORTRAN_HAVE_SIZEOF).
[svn-r15572] Desciption:Was not returning the correct fortran types when -i8 and -r8 flag was specified, fixed. This code is now depreciated and only used when SIZEOF function is not available, H5test_kind_SIZEOF.f90 should be used instead.
[svn-r15571] Description:H5test_kind_SIZEOF.f90 is the preferred portable program used for Fortran type detection. It uses the intrinsic Fortran function SIZEOF. This program should be used instead of H5test_kind.f90 if the SIZEOF function is available. Most of the newer Fortran compilers support SIZEOF.
[svn-r15570] Description:Added a test for the availability of intrinsic Fortran function SIZEOF. Sets the global variable FORTRAN_HAVE_SIZEOF depending if SIZEOF is available.
[svn-r15561] Description: Update extensible array code with function to open an existing earray, add more tests and avoid running the test when core/split/family/multi VFDs are used. Clean up fractal heap test code a bit and expand some of the tests a
little bit also.
Tested on:
Mac OS X/32 10.5.4 (amazon) in debug mode
Mac OS X/32 10.5.4 (amazon) w/C++ & FORTRAN, w/threadsafe,
in production mode
FreeBSD/32 6.3 (duty) in debug mode
FreeBSD/64 6.3 (liberty) w/C++ & FORTRAN, in debug mode
Linux/32 2.6 (...
[svn-r15557] bug fix: the -m flag add a long description of "--threshold" that was changed to "--minimum" because "--threshold" now refers to the threshold parameter for H5Pset_alignmenttested: linux
[svn-r15551] 1) There are 2 new command line parameters for h5repack. Together they allow a call to H5Pset_alignment to be made
-t T, --threshold=T Threshold value for H5Pset_alignment
-a A, --alignment=A Alignment value for H5Pset_alignment
2) bug fix
the printing of the dataset name was not done for references (verbose mode)
tested: windows, linux
[svn-r15549] Description: Initial checkin of extensible array data structure prototype code and regression tests. Initial definitions for revised FUNC_ENTER/LEAVE and error reporting
macros, which are being vetted in the extensible array code.
Minor warning and formatting cleanups in other sections of code.
Tested on:
Mac OS X/32 10.5.4 (amazon) in debug mode
Mac OS X/32 10.5.4 (amazon) w/C++ & FORTRAN, w/threadsafe,
in production mode
FreeBSD/32 ...
[svn-r15546] Purpose: Add new Fortran source fileDescription:
There is a new Fortran file, H5_DBLE_InterfaceInclude.f90, which needs to be added to Windows. There is also another version, *InterfaceExclude.f90, which is for users that build with the -r8 flag. However, we don't include this on Windows, as it is not currently a common option. If we get requests from users, we can add documentation for using this alternative interface.
Teste...
[svn-r15543] Description:Put the DOUBLE PRECISION interfaces in a separate module and added a USE statement for the module. The interfaces are included/excluded depending on
the state of FORTRAN_DEFAULT_REALisDBLE_F which detects if the default REAL is DOUBLE PRECISION. This allows the library to be compiled with -r8 Fortran flag without the user needing to change the source code.
[svn-r15541] Description:Put the DOUBLE PRECISION interfaces in a separate module. The interfaces are included/excluded depending on
the state of FORTRAN_DEFAULT_REALisDBLE_F which detects if the default REAL is DOUBLE PRECISION. This allows the library to be compiled with -r8 Fortran flag without the user needing to change the source code.
[svn-r15540] Description:Enable building shared library for fortran by adding the flag -fPIC to the compile flags for versions of Intel Fortran compiler >=9
[svn-r15535] Description:Added files:
./fortran/src/H5_DBLE_InterfaceInclude.f90
./fortran/src/H5_DBLE_InterfaceExclude.f90
Contains the DOUBLE PRECSION interfaces depending on
the state of FORTRAN_DEFAULT_REALisDBLE_F.
[svn-r15534] Description:Added a test program to determine if -r8 or the default of REAL is DOUBLE PRECISION. Sets the variable FORTRAN_DEFAULT_REALisDBLE_F to true if default REAL is DOUBLE PRECISION.
[svn-r15526] userblock optionsonly write the user block of a pre-existing file with user block in case there is no input user block file
tested: windows, linux
[svn-r15524] Purpose: Add new h5repack test to WindowsDescription:
There was one new h5repack test added recently. This commit also adds it to the Windows test script
Tested:
VS2005 on WinXP
[svn-r15522] Purpose: Fix Windows link dependencies in new app_ref DLL projectDescription:
The app_refdll project was set to link with static version of hdf5 and libtest projects, which were causing the build to fail, only in Visual Studio .NET 2003, and was previously overlooked. This corrects those errors.
Tested:
VS.NET on WinXP
Quincey Koziol
Muqun Yang
Scott Wegner
Private HDF
Scot Breitenfeld
Christian Chilan
Pedro Vicente Nunes
Neil Fortner