[svn-r18837] Description: Remove the size parameter from H5[A]C_unprotect() and the H5[A]C__SIZE_CHANGED_FLAG, switching all clients & tests over to using H5[A]C_resize_entry appropriately.Tested on:
FreeBSD/32 6.3 (duty) in debug mode
FreeBSD/64 6.3 (liberty) w/C++ & FORTRAN, in debug mode
Linux/32 2.6 (jam) w/PGI compilers, w/default API=1.8.x,
w/C++ & FORTRAN, w/threadsafe, in debug mode
Linux/64-amd64 2.6 (amani) w/Intel compilers, w/default API=1.6.x,
w/C++ & FORTRAN, in production mode
Solaris/32 2.10 (...
[svn-r18834] Description: Correct function enter macro and add 'done' label, for routine that is only invoked when configured with --enable-debug=all.Tested on:
Mac OS X/32 10.6.3 (amazon) w/debug & production
(too minor to require h5committest)
[svn-r18832] Description: Correct error where variable didn't always get initialized correctly.Tested on:
Mac OS X/32 10.6.3 (amazon) w/debug & prod
Windows w/debug & prod
[svn-r18827] Description: Correct error where variable didn't always get initialized correctly.Tested on:
Mac OS X/32 10.6.3 (amazon) w/debug & prod
Windows w/debug & prod
[svn-r18818] Bug fix: Fixed a bug in the H5DSdetach_scale function when 0 bytes were allocated after the last reference to a dim. scale was removed from the list of references in a VL element of the DIMENSION_LIST attribute; modified the function to comply with the Spec: DIMENSION_LIST attribute is deleted now when no dimension scales left attached.Platforms tested: jam with electric fence, amani amd linew
[svn-r18813] Purpose: Add bug fixes for Tools.Description:
Added list:
1726 - NPOESS: h5repack loses attributes for datasets of type H5T_REFERENCE
1814 - NPOESS: h5repack doesn't handle references to the groups as an
element of a dataset
1817 - h5copy fail to copy dangling link by specifying link path directly
1793 - h5ls on a non-existent file gives 0 return code
Tested:
no, just text update.
[svn-r18808] Purpose: Fixed file cleanup during make distclean / make check.
Description:
The h5jam Makefile and the h5importtestutil.sh script both included cleanup
steps that removed "*.txt" from the directory. This resulted in the new
CMake specific configuration file, CMakeLists.txt, getting blown away by
make distclean (for h5jam) and make check (for h5import).
I've removed the *.txt...
[svn-r18804] Purpose: Fix memory leaks
Description
Added a routine to free memory which addresses a memory leak
when variable length strings are used as fill values.
Tested:
h5committest and valgrind (on jam/amani) to confirm freed memory.
[svn-r18803] Description: Added notes about
+ PropList::PropList(id) pclass id/plist id
+ new DataSet::getInMemDataSize
+ CommonFG::getLinkval and CommonFG::getComment take default values
+ bugzilla 1061
+ read/write methods of DataSet and Attribute
[svn-r18791] Description: Correct error in H5C_resize_entry() where protected entry sizes were not updated if the entry being resized was both pinned and protected.Tested on:
FreeBSD/32 6.3 (duty) in debug mode
FreeBSD/64 6.3 (liberty) w/C++ & FORTRAN, in debug mode
Linux/32 2.6 (jam) w/PGI compilers, w/default API=1.8.x,
w/C++ & FORTRAN, w/threadsafe, in debug mode
Linux/64-amd64 2.6 (amani) w/Intel compilers, w/default API=1.6.x,
w/C++ & FORTRAN, in production mode
Solaris/32 2.10 (...
[svn-r18759] pull r18757 from 1.8 branch Enable tools lib to be built as a dll on windows. Added two get/set functions for progname and d_status. Also add windows import/export declarations to functions. Updated error_mesg() and warn_mesg() to remove progname argument and use get functionsTested:
Windows, linux
[svn-r18745] Purpose: Fixed bug 1852Description:
When a property class id is given to PropList(id), create new prop list,
but when a property list id is given, make a copy of it.
Platforms tested:
Linux/32 2.6 (jam)
FreeBSD/64 6.3 (liberty)
SunOS 5.10 (linew)
[svn-r18740] Description: Bring r18738 from metadata journaling 'merging' branch to trunk: Switch H5AC_resize_pinned_entry() to work on protected entries as well,
and rename to H5AC_resize_entry()
Tested on:
FreeBSD/32 6.3 (duty) in debug mode
FreeBSD/64 6.3 (liberty) w/C++ & FORTRAN, in debug mode
Linux/32 2.6 (jam) w/PGI compilers, w/default API=1.8.x,
w/C++ & FORTRAN, w/threadsafe, in debug mode
Linux/64-amd64 2.6 (amani) w/Intel c...
[svn-r18721] Description: Bring r18720 from metadata journaling merging branch to trunk: Bring changes from metadata journaling branch to 'merging' branch:
Rename H5[A]C_mark_pinned_or_protected_entry_dirty() to
H5[A]C_mark_entry_dirty() and get rid of H5[A]C_mark_pinned_entry_dirty().
Tested on:
FreeBSD/32 6.3 (duty) in debug mode
FreeBSD/64 6.3 (liberty) w/C++ & FORTRAN, in debug mode
Linux/32 2.6 (jam) w/PGI compilers, w/default API=1.8.x,
...
[svn-r18709] Purpose: Improve configure's large-file support control.
Description:
Modified configure to now attempt to add defines necessary for
supporting largefiles on all systems, instead of solely on linux. This
is in response to user requests to enable largefile support on Solaris
by default, as well as to give extra control on AIX (instead of just
jamming the necessary flag into t...
[svn-r18702] Description: Bring r18672 from metadata journaling "merging" branch to trunk: Mostly changes to move to only using one 'user data' parameter for
calls to H5AC_protect(), along with some minor reformatting code cleanups.
Tested on:
FreeBSD/32 6.3 (duty) in debug mode
FreeBSD/64 6.3 (liberty) w/C++ & FORTRAN, in debug mode
Linux/32 2.6 (jam) w/PGI compilers, w/default API=1.8.x,
w/C++ & FORTRAN, w/threadsafe, in debug mode
...
[svn-r18685] Description: Added missing overloaded function getObjTypeByIdx to return type name
as a char*.
Platforms tested:
Linux/32 2.6 (jam)
FreeBSD/64 6.3 (liberty)
SunOS 5.10 (linew)
[svn-r18664] Description: Add a few H5Tequal() calls to make certain that the native datatype constructed with H5Tget_native_type() is identical to the memory datatype created from the struct in memory.Tested on:
FreeBSD/32 6.3 (duty) in debug mode
FreeBSD/64 6.3 (liberty) w/C++ & FORTRAN, in debug mode
Linux/32 2.6 (jam) w/PGI compilers, w/default API=1.8.x,
w/C++ & FORTRAN, w/threadsafe, in debug mode
Linux/64-amd64 2.6 (amani) w/Intel compilers, w/default API=1.6.x,
w/C++ & FORTRAN, in production mode
Solaris/32 2.10 (linew) w/deprecated symbols disabled...
[svn-r18660] Description: Tweak H5detect to be even more careful about its actions, to allow gcc 4.5 to use '-O3'. Also, minor code cleanups in H5Tfloat.cTested on:
FreeBSD/64 6.3 (liberty) w/gcc 4.5 & production mode
(h5committest not necessary/appropriate)
[svn-r18659] Bug: 1764Description:
longjmp do not necessary restore signal that is blocked during the signal
handling. This caused the Alignment test to fail quietly, resulting in wrong
alignment information which will cause failures later.
Solution:
One can use sigsetjmp/siglongjmp to restore signal handling but not all systems
such as Cray XT or VMS supports sigsetjmp. Backup solution is to use
sigprocmask to re...
[svn-r18648] In H5T_get_native_type of H5Tnative.c, I changed the way that the offset, alignment, and size of nested compound type are calculated by using H5T_cmp_offset. The old way had a bug in it (see bug #1850).Tested on jam. I tested the same change for 1.8 on amani, linew, and jam.
Quincey Koziol
Jonathan Kim
Private HDF
Elena Pourmal
Allen Byrne
Mike McGreevy
Binh-Minh Ribler
Albert Cheng
Raymond Lu
Neil Fortner