[svn-r15800] Description: Bring file free space branch changes through r15795 into trunk, which includes a fair bit of code cleanup & rearrangement along with a couple of bug fixes also.Tested on:
Mac OS X/32 10.5.5 (amazon) in debug mode
Mac OS X/32 10.5.5 (amazon) w/C++ & FORTRAN, w/threadsafe,
in production mode
FreeBSD/32 6.3 (duty) in debug mode
FreeBSD/64 6.3 (liberty) w/C++ & FORTRAN, in debug mode
Linux/32 2.6 (kagiso) w/PGI compilers, w/C++ & FORTRAN, w/threadsafe,
...
[svn-r15798] Description: Change H5Tcommit() call to H5Tcommit2() call, so that library builds with the default API set to v16 work.Tested on:
Linux/64 2.4 (smirom) w/default API set to v16
[svn-r15796] Purpose: Close bug #1322Description: Fixes a possible datatype id leak that could occur during compound
datatype conversion, or more precisely, when unregistering those conversions.
Datatype ids normally registered by the library are no longer visible to the
application via H5Fget_obj_ids and H5Fget_obj_count.
Tested: kagiso, linew, smirom (h5committest)
[svn-r15792] Bug fix. When detecting the user requested filters, the "all" option was not taken in consideration when printing the compression ratioTested: windows, linux
[svn-r15789] Purpose: Add new source file, H5EAsblock.c, to WindowsDescription:
The source file H5EAsblock.c was recently added to svn. This checkin also adds it into our Windows project files.
Note that it hasn't been included in the Visual Studio .NET projects. We are discontinuing our support for Visual Studio .NET in the trunk so we can use C99 features not available in Visual Studio .NET. From this point forward, the Visual Studio .NET projects won't ...
[svn-r15762] Changes for bug #1247 so that the user can specify the driver to use when opening the external linked target file. 1. Two new public routines are added to H5Plapl.c as well as "del/copy/close" callbacks for the property itself. 2. Modify H5L_extern_traverse() to use the fapl set via H5Pset_elink_fapl() and retrieve via H5Pget_elink_fapl(). 3. Add 3 tests to links.c to verify H5Pse...Also fix the compiler warning for the "if condition" in
H5_build_extpath() of H5system.c.
[svn-r15757] Bug #1312 Solution: Check for the existence of chunks before pruning them (an assertion was triggered when attempting to do so)Tested: windows , linux, solaris
[svn-r15755] Description: Fix some minor problems w/extensible array super blocks and extend tests.Tested on:
Mac OS X/32 10.5.5 (amazon) in debug mode
Mac OS X/32 10.5.5 (amazon) w/C++ & FORTRAN, w/threadsafe,
in production mode
FreeBSD/32 6.3 (duty) in debug mode
FreeBSD/64 6.3 (liberty) w/C++ & FORTRAN, in debug mode
Linux/32 2.6 (kagiso) w/PGI compilers, w/C++ & FORTRAN, w/threadsafe,
...
[svn-r15746] Description: Add support for extensible array "super block".Tested on:
Mac OS X/32 10.5.5 (amazon) in debug mode
Mac OS X/32 10.5.5 (amazon) w/C++ & FORTRAN, w/threadsafe,
in production mode
FreeBSD/32 6.3 (duty) in debug mode
FreeBSD/64 6.3 (liberty) w/C++ & FORTRAN, in debug mode
Linux/32 2.6 (kagiso) w/PGI compilers, w/C++ & FORTRAN, w/threadsafe,
...
[svn-r15741] Description: Extend testing for data block reachable from the index block.Tested on:
Mac OS X/32 10.5.5 (amazon) in debug mode
Mac OS X/32 10.5.5 (amazon) w/C++ & FORTRAN, w/threadsafe,
in production mode
FreeBSD/32 6.3 (duty) in debug mode
FreeBSD/64 6.3 (liberty) w/C++ & FORTRAN, in debug mode
Linux/32 2.6 (kagiso) w/PGI compilers, w/C++ & FORTRAN, w/threadsafe,
...
[svn-r15738] Description: Correct a couple of minor bugs for handling data blocks from index block and extend tests further.Tested on:
Mac OS X/32 10.5.5 (amazon) in debug mode
Mac OS X/32 10.5.5 (amazon) w/C++ & FORTRAN, w/threadsafe,
in production mode
FreeBSD/32 6.3 (duty) in debug mode
FreeBSD/64 6.3 (liberty) w/C++ & FORTRAN, in debug mode
Linux/32 2.6 (kagiso) w/PGI compilers, w/C++ & FORTRAN, w/threadsafe,
...
[svn-r15723] Purpose: Add h5import test to WindowsDescription:
Add a new test for h5import to check for alignment. Also fix the failing h5repack test, now that ublock has been added to svn.
Tested
VS2005 on WinXP
[svn-r15721] Added a file with user block data to be used by the h5repack windows shell script only Note: for the unix shell script this file is not used
[svn-r15704] I changed the return values of H5Fget_obj_ids and H5Fget_obj_count to ssize_t and modified C++ and Fortran API functions. This is for bug #1245. Tested on smirom, linew, and kagiso.
[svn-r15703] Description: Further progress on extensible array implementation - add support for more data blocks from index block.Tested on:
Mac OS X/32 10.5.4 (amazon) in debug mode
Mac OS X/32 10.5.4 (amazon) w/C++ & FORTRAN, w/threadsafe,
in production mode
FreeBSD/32 6.3 (duty) in debug mode
FreeBSD/64 6.3 (liberty) w/C++ & FORTRAN, in debug mode
Linux/32 2.6 (kagiso) w/PGI compilers, w/C++ & FORTRAN, w/threadsafe,
...
[svn-r15701] Description: Remove some unused variables.Tested on:
Mac OS X/32 10.5.4 (amazon) in debug mode
Mac OS X/32 10.5.4 (amazon) w/C++ & FORTRAN, w/threadsafe,
in production mode
FreeBSD/32 6.3 (duty) in debug mode
FreeBSD/64 6.3 (liberty) w/C++ & FORTRAN, in debug mode
Linux/32 2.6 (kagiso) w/PGI compilers, w/C++ & FORTRAN, w/threadsafe,
...
[svn-r15699] Bug fix #1281 The TEXTFPE was described in the usage (read floats in scientific notation) but was not implemeneted. Solution: remove TEXTFPE from the help system and have the TEXTFPE input type do the same thing as TEXTPF currently does to support backwards compatibility (the format read for both TEXTFPE and TEXTPF is %f) added a testtested: windows, linux
[svn-r15692] Description:Added the optional 'mounted' variable to H5Gget_info_by_idx_f/H5Gget_info_f/H5Gget_info_by_name_f to see that it passes the correct values.
[svn-r15687] Description:Fixed
nh5sget_select_hyper_blocklist_c
nh5sget_select_elem_pointlist_
for bug 1319. by transposing arrays for C-FORTRAN convention.
[svn-r15682] Purpose: fix bug 1298Description: The optimized "subset" compound conversion function would
improperly copy the "blank" space at the end of compound types. Modified
H5T_conv_struct_init to detect when the subset type has extra space at the end,
and calculate the size of the data that should be copied into the conversion
buffer for each element. Changes to the functions that implement these
conversions.
Tested: k...
[svn-r15681] Description: Correct small error in allocating data block elements and add some more tests.Tested on:
Mac OS X/32 10.5.4 (amazon) in debug mode
Mac OS X/32 10.5.4 (amazon) w/C++ & FORTRAN, w/threadsafe,
in production mode
FreeBSD/32 6.3 (duty) in debug mode
FreeBSD/64 6.3 (liberty) w/C++ & FORTRAN, in debug mode
Linux/32 2.6 (kagiso) w/PGI compilers, w/C++ & FORTRAN, w/threadsafe,
...
[svn-r15676] Description: Centralize all macros for declaring "magic numbers"/signatures for objects in the file into src/H5Fprivate.h, so it's easier to know what values have already been defined, etc.Tested on:
Mac OS X/32 10.5.4 (amazon) in debug mode
Mac OS X/32 10.5.4 (amazon) w/C++ & FORTRAN, w/threadsafe,
in production mode
FreeBSD/32 6.3 (duty) in debug mode
FreeBSD/64 6.3 (liberty) w/C++ & FORTRAN, in debug mode
Linux/32 2.6 (kagiso) w/PGI compilers, w/C++ & FORTRAN, w/threadsafe,
...
[svn-r15675] Purpose: Add new source file H5EAdblock.c to Windows.Description:
New source file H5EAdblock.c was added to the library. This checkin adds the file to our Windows projects, hdf5 and hdf5dll (VS2005 and VS.NET project files)
Tested:
Build only, VS2005 on WinXP
[svn-r15674] Description: Add base support for extensible array "data blocks" to code, tests and h5debug.Tested on:
Mac OS X/32 10.5.4 (amazon) in debug mode
Mac OS X/32 10.5.4 (amazon) w/C++ & FORTRAN, w/threadsafe,
in production mode
FreeBSD/32 6.3 (duty) in debug mode
FreeBSD/64 6.3 (liberty) w/C++ & FORTRAN, in debug mode
Linux/32 2.6 (kagiso) w/PGI compilers, w/C++ & FORTRAN, w/threadsafe,
...
[svn-r15668] Purpose: Add feature requested in bug #1282Description: Adds capability to h5ls to traverse external links when the -r
(recursive) option is given. Changes to the way absolute path names are patched
in h5trav.c. Changes to the way recursive traversal starting from a non-root
group is handled (which also fixes some preexisting issues). Tests added for
these cases.
Tested: kagiso, smirom, linew (h5committest)
[svn-r15665] Bug fix: (ID 1157)Description:
Program would crash, complaining MPI calls were invoked after
MPI_Finalize() has occurred. Previously, H5close() before
MPI_Finalize() would remove the crash.
Solution:
It turned out that two H5 property objects (mpio_pl and acc_tpl)
were not closed before MPI_Finalize(). In the at_exit code,
HDF5 library attempted to close them by releasing the MPI Communicators
in them too. Tha...
[svn-r15661] Purpose: Add szip/zlib link dependencies to Windows earray[dll] projectsDescription:
earray[dll] builds were failing on Windows because of missing link dependencies to szip and zlib libraries (amongst other reasons). This checkin adds those dependencies.
[svn-r15660] Purpose: Fix minor Windows issues in new H5EA interface.Description:
We've run into a few Windows-specific problems with the new H5EA interface. In particular, this checkin makes the following changes:
-- Change shutdown defined in earray.c to shutdown_ea, to avoid conflicting with another Windows-specific system call.
-- Prefix H5EA_get in H5EAprivate.h with H5_DLL, so the function is properly exported in Windows DLL version.
These changes should...
Quincey Koziol
Neil Fortner
Pedro Vicente Nunes
Scott Wegner
Christian Chilan
Vailin Choi
Scot Breitenfeld
Private HDF
Albert Cheng
Raymond Lu