Author Commit Message Commit Date Jordan Henderson f66acae83b5 Implement H5Oincr/decr_refcount 05 Aug 2019 Jordan Henderson 87d4fc81344 Implement H5Ovisit
Add lexical sorting to dkeys for groups and to akeys for other objects 02 Aug 2019 Jordan Henderson 33ab51e3d2a Implement H5Oexists_by_name
Implement H5Oflush/refresh with associated no-op functions
Refactor H5_daos_link_follow to return FALSE if a soft link doesn't
resolve 30 Jul 2019 Jordan Henderson 47730b13c58 M Merging in latest from upstream (HDF5VOL/daos-vol:refs/heads/master)
* commit '92a5dfc962496e3c6607e544faec00d4a4c97e45':
Removed unnecessary H5VL_DAOS_UNUSED
Implement H5Drefresh 29 Jul 2019 Jordan Henderson 63396a97549 Refactor H5Oget_info implementation into its own function 26 Jul 2019 Jordan Henderson 84b08c0f5ba Fix data corruption issue with partial edge chunks 18 Jul 2019 Jordan Henderson c60f46e0248 Fix issue with locating objects by path with leading './'
Check for chunked storage layout before extending dataset's dataspace 15 Jul 2019 Neil Fortner 883917bfb69 Add support for (tracking and indexing) link creation order. No way to query or lookup
by creation order yet. Other minor fixed. 14 Aug 2019 Jerome Soumagne ebbf4f1ff10 M Merge pull request #42 in HDF5VOL/daos-vol from ~JSOUMAGNE/daos-vol:master to master
* commit '77e4eb7cd45210d9a735d59f81e6f9819d334338':
Add support for new DAOS API changes with CMake option
Update test scripts and add DAOS agent support 29 Jul 2019 Jerome Soumagne 77e4eb7cd45 Add support for new DAOS API changes with CMake option 19 Jul 2019 Jerome Soumagne dc72e7472c1 Update test scripts and add DAOS agent support 19 Jul 2019 Neil Fortner 92a5dfc9624 M Merge pull request #43 in HDF5VOL/daos-vol from ~NFORTNE2/daos-vol:master to master
* commit '2de72be35baf2d6e8eeb4adc1e91bdc3d2a335c4':
Removed unnecessary H5VL_DAOS_UNUSED 23 Jul 2019 Neil Fortner 2de72be35ba Removed unnecessary H5VL_DAOS_UNUSED 23 Jul 2019 Neil Fortner 25d8dc88541 M Merge pull request #41 in HDF5VOL/daos-vol from ~NFORTNE2/daos-vol:master to master
* commit 'c66e779661be6a8a51a4bd554f9a24374da3d257':
Implement H5Drefresh 23 Jul 2019 Neil Fortner c66e779661b M Merge branch 'master' of ssh://bitbucket.hdfgroup.org:7999/~nfortne2/daos-vol 12 Jul 2019 Neil Fortner fdcd4921c68 M Merge pull request #39 in HDF5VOL/daos-vol from ~NFORTNE2/daos-vol:master to master
* commit '84fbcc2caf73d5d926fb764c1b21a9e63fc75edb':
Make H5Dset_extent collective, and add parameter checking. 12 Jul 2019 Jordan Henderson cca1794f8e9 M Merge pull request #40 in HDF5VOL/daos-vol from ~JHENDERSON/daos-vol:feature/parallel_map_tests to master
* commit '0fcf225dbdd19219743e18e38b672300478fbe4b':
Add parallel map tests
Initial parallel Map tests commit 11 Jul 2019 Jordan Henderson 0fcf225dbdd Add parallel map tests
Make sure to only call MPI_Barrier on file close if the pool size is >1
Add temporary workaround to H5Oopen for HDF5 incorrectly initializing
LAPL 11 Jul 2019 Jordan Henderson e31ad57ef9d Initial parallel Map tests commit 11 Jul 2019 Neil Fortner 3930dea9124 Implement H5Drefresh 12 Jul 2019 Neil Fortner 84fbcc2caf7 Make H5Dset_extent collective, and add parameter checking. 11 Jul 2019 Neil Fortner 7eb4ca5ce66 M Merge pull request #38 in HDF5VOL/daos-vol from ~NFORTNE2/daos-vol:master to master
* commit '46f6fd3160e6554326b3ff343113ae8bbef42a79':
Re-add removed struct initialization. NULL is guaranteed to compare equal to (void *)0 but that does not mean it is implemented with all 0 bits, therefore we cannot rely on calloc to set pointer in the struct to NULL. DAOS_HDL_INVAL is not guaranteed to remain 0 to my knowledge. 11 Jul 2019 Neil Fortner 46f6fd3160e M Merge branch 'master' of ssh://bitbucket.hdfgroup.org:7999/~nfortne2/daos-vol 11 Jul 2019 Jordan Henderson a0818772151 M Merge pull request #37 in HDF5VOL/daos-vol from ~JHENDERSON/daos-vol:master to master
* commit '641ca7589d5630a458dc699fb87bf620d3aa7695':
Add comments about the priority order of H5_daos_cont_get_fapl_info
Rework collective metadata reads/writes to match HDF5 default behavior
Skip daos_obj_fetch/daos_obj_update call when no selection in file space
Add routine for retrieving MPI info from FAPL 11 Jul 2019 Jordan Henderson 641ca7589d5 Add comments about the priority order of H5_daos_cont_get_fapl_info 10 Jul 2019 Jordan Henderson e5aca6c342a Rework collective metadata reads/writes to match HDF5 default behavior
Use an MPI_Barrier to prevent invalid handle issues when rank 0 would
rush ahead and close a container handle before the other ranks were done
using it 10 Jul 2019 Jordan Henderson 35974c400cf Skip daos_obj_fetch/daos_obj_update call when no selection in file space 09 Jul 2019 Jordan Henderson eb54136786f Add routine for retrieving MPI info from FAPL 08 Jul 2019 Ray Lu 23926d1b93e M Merge pull request #34 in HDF5VOL/daos-vol from ~SONGYULU/daos-vol:rayl/more_test_map4 to master
* commit '234efdc8bd1c632a74dbc869836e5f0dcc023cc4':
Adding the test case for nested compound datatype with variable-length type as a field. This case is commented out until it's supported. 09 Jul 2019 songyulu 234efdc8bd1 Adding the test case for nested compound datatype with variable-length type as a field. This case is commented out until it's supported. 03 Jul 2019 Ray Lu 5482e694124 M Merge pull request #31 in HDF5VOL/daos-vol from ~SONGYULU/daos-vol:rayl/more_test_map3 to master
* commit '784f88ffb19078f181bc312642c6f07feebe2191':
Minor revision to the previous commit.
Adding a comment.
Adding iteration to verify that the deleted entry no longer exists. 08 Jul 2019 songyulu 784f88ffb19 Minor revision to the previous commit. 08 Jul 2019 songyulu 66a80f4fcce M Merge branch 'master' of https://bitbucket.hdfgroup.org/scm/~songyulu/daos-vol into rayl/more_test_map3 08 Jul 2019 Neil Fortner daffd3004d3 M Merge pull request #36 in HDF5VOL/daos-vol from ~NFORTNE2/daos-vol:master to master
* commit 'b74b77211481660d1055ecac8563af61555c6bf4':
Fix inappropriate usage of D_FUNC_LEAVE_API in daos_vol_map.c 05 Jul 2019 songyulu 71074266440 M Merge branch 'master' of https://bitbucket.hdfgroup.org/scm/~songyulu/daos-vol into rayl/more_test_map3 04 Jul 2019 songyulu 7d78c514b08 Adding a comment. 01 Jul 2019 songyulu c8d064353b8 Adding iteration to verify that the deleted entry no longer exists. 01 Jul 2019 Neil Fortner f018892ee87 Re-add removed struct initialization. NULL is guaranteed to compare
equal to (void *)0 but that does not mean it is implemented with all 0
bits, therefore we cannot rely on calloc to set pointer in the struct to
NULL. DAOS_HDL_INVAL is not guaranteed to remain 0 to my knowledge. 11 Jul 2019 Neil Fortner b74b7721148 Fix inappropriate usage of D_FUNC_LEAVE_API in daos_vol_map.c 05 Jul 2019 Neil Fortner 7a6cc2aa2ca M Merge pull request #35 in HDF5VOL/daos-vol from ~NFORTNE2/daos-vol:master to master
* commit 'd2df71fc29fe4f4d43409ed589f28c7b94b74514':
Add check for exceeding maximum dimensions to H5Dset_extent.
Implement basic form of H5Dset_extent that simply writes the new dataspace extent to the dataset metadata.
Fix an issue with H5Mdelete_key which would cause the deleted key to still be returned by H5Miterate. 05 Jul 2019 Neil Fortner d2df71fc29f Add check for exceeding maximum dimensions to H5Dset_extent. 05 Jul 2019 Neil Fortner 957290cded5 Implement basic form of H5Dset_extent that simply writes the new
dataspace extent to the dataset metadata. 05 Jul 2019 Neil Fortner fedee89115c M Merge branch 'master' of ssh://bitbucket.hdfgroup.org:7999/~nfortne2/daos-vol 05 Jul 2019 Neil Fortner 1c24cabc6e2 Fix an issue with H5Mdelete_key which would cause the deleted key to
still be returned by H5Miterate. 05 Jul 2019 Jerome Soumagne 184b7809ab9 M Merge pull request #32 in HDF5VOL/daos-vol from ~JSOUMAGNE/daos-vol:handle_cleanup to master
* commit '611bb220b9deddd17b2d6c2ed11e3b642d69eaa5':
Fix comments and add assert
Rework and clean up daos global handle bcast 05 Jul 2019 Jerome Soumagne 611bb220b9d Fix comments and add assert 05 Jul 2019 Jerome Soumagne 0f4ffb0a568 Rework and clean up daos global handle bcast
Rework and clean up file create and file open 02 Jul 2019 Neil Fortner c3c92751890 M Merge pull request #33 in HDF5VOL/daos-vol from ~NFORTNE2/daos-vol:master to master
* commit '20bf6e6c3874e34c2e953dd864359e4e0b8265a4':
Rework iterate test callback for large number of keys to take advantage of knowledge of the algorithm used to generate the random key in order to quickly locate the key in the local key array. This should allow the iterate test to scale to a larger number of keys. Also minor error message/comment changes. 03 Jul 2019 Neil Fortner 20bf6e6c387 Rework iterate test callback for large number of keys to take advantage
of knowledge of the algorithm used to generate the random key in order
to quickly locate the key in the local key array. This should allow the
iterate test to scale to a larger number of keys. Also minor error
message/comment changes. 03 Jul 2019 Jordan Henderson 84978febba7 M Merge pull request #30 in HDF5VOL/daos-vol from ~JHENDERSON/daos-vol:feature/chunking_updates to master
* commit 'f222f602d11a0b3ff8d25b442fcf34ab87d95468':
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